Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D28Q2M2D7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TBC1D28Q2M2D7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D28Q2M2D7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.77■□□□□ 0.6
TBC1D28Q2M2D7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D28Q2M2D7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TBC1D28Q2M2D7 AC080038.3-201ENST00000623346 1952 ntBASIC18.77■□□□□ 0.59
TBC1D28Q2M2D7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
TBC1D28Q2M2D7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TBC1D28Q2M2D7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TBC1D28Q2M2D7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 AC019069.1-201ENST00000610008 1333 ntBASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 LINC00526-201ENST00000581067 1875 ntBASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D28Q2M2D7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 AL354811.1-201ENST00000610286 706 ntBASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 AL358852.1-201ENST00000623174 1268 ntBASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D28Q2M2D7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 AC012414.1-201ENST00000556676 535 ntBASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 SMUG1P1-201ENST00000590640 811 ntBASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D28Q2M2D7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TBC1D28Q2M2D7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D28Q2M2D7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D28Q2M2D7 AL117328.2-201ENST00000624617 1940 ntBASIC18.73■□□□□ 0.59
TBC1D28Q2M2D7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.73■□□□□ 0.59
TBC1D28Q2M2D7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D28Q2M2D7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D28Q2M2D7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D28Q2M2D7 AL034346.1-201ENST00000568244 1277 ntBASIC18.73■□□□□ 0.59
TBC1D28Q2M2D7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D28Q2M2D7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.73■□□□□ 0.59
TBC1D28Q2M2D7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D28Q2M2D7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D28Q2M2D7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D28Q2M2D7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D28Q2M2D7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TBC1D28Q2M2D7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D28Q2M2D7 ZNRF2P3-201ENST00000424200 374 ntBASIC18.72■□□□□ 0.59
TBC1D28Q2M2D7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.72■□□□□ 0.59
TBC1D28Q2M2D7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.72■□□□□ 0.59
TBC1D28Q2M2D7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.72■□□□□ 0.59
TBC1D28Q2M2D7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D28Q2M2D7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D28Q2M2D7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.72■□□□□ 0.59
TBC1D28Q2M2D7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D28Q2M2D7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D28Q2M2D7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D28Q2M2D7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.72■□□□□ 0.59
TBC1D28Q2M2D7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D28Q2M2D7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.72■□□□□ 0.59
TBC1D28Q2M2D7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.71■□□□□ 0.59
TBC1D28Q2M2D7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms