Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC38.71■■■■□ 3.79
HMGXB3Q12766 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
HMGXB3Q12766 DUSP8P5-201ENST00000422884 1815 ntBASIC38.71■■■■□ 3.79
HMGXB3Q12766 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC38.71■■■■□ 3.79
HMGXB3Q12766 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
HMGXB3Q12766 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC38.7■■■■□ 3.79
HMGXB3Q12766 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC38.7■■■■□ 3.79
HMGXB3Q12766 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
HMGXB3Q12766 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC38.7■■■■□ 3.79
HMGXB3Q12766 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC38.7■■■■□ 3.79
HMGXB3Q12766 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
HMGXB3Q12766 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC38.69■■■■□ 3.78
HMGXB3Q12766 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC38.69■■■■□ 3.78
HMGXB3Q12766 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC38.69■■■■□ 3.78
HMGXB3Q12766 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC38.69■■■■□ 3.78
HMGXB3Q12766 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC38.69■■■■□ 3.78
HMGXB3Q12766 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC38.69■■■■□ 3.78
HMGXB3Q12766 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
HMGXB3Q12766 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC38.68■■■■□ 3.78
HMGXB3Q12766 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
HMGXB3Q12766 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC38.68■■■■□ 3.78
HMGXB3Q12766 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC38.68■■■■□ 3.78
HMGXB3Q12766 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC38.68■■■■□ 3.78
HMGXB3Q12766 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC38.68■■■■□ 3.78
HMGXB3Q12766 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC38.68■■■■□ 3.78
HMGXB3Q12766 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
HMGXB3Q12766 AC022211.4-201ENST00000625094 2161 ntBASIC38.68■■■■□ 3.78
HMGXB3Q12766 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
HMGXB3Q12766 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC38.68■■■■□ 3.78
HMGXB3Q12766 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC38.67■■■■□ 3.78
HMGXB3Q12766 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC38.67■■■■□ 3.78
HMGXB3Q12766 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC38.67■■■■□ 3.78
HMGXB3Q12766 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC38.67■■■■□ 3.78
HMGXB3Q12766 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
HMGXB3Q12766 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC38.66■■■■□ 3.78
HMGXB3Q12766 MMD2-204ENST00000612910 778 ntTSL 5 BASIC38.66■■■■□ 3.78
HMGXB3Q12766 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC38.66■■■■□ 3.78
HMGXB3Q12766 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC38.66■■■■□ 3.78
HMGXB3Q12766 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC38.66■■■■□ 3.78
HMGXB3Q12766 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC38.65■■■■□ 3.78
HMGXB3Q12766 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC38.65■■■■□ 3.78
HMGXB3Q12766 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC38.65■■■■□ 3.78
HMGXB3Q12766 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC38.65■■■■□ 3.78
HMGXB3Q12766 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC38.65■■■■□ 3.78
HMGXB3Q12766 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
HMGXB3Q12766 AC006058.3-201ENST00000606217 1069 ntBASIC38.65■■■■□ 3.78
HMGXB3Q12766 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
HMGXB3Q12766 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
HMGXB3Q12766 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC38.65■■■■□ 3.78
HMGXB3Q12766 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
HMGXB3Q12766 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
HMGXB3Q12766 BAALC-201ENST00000297574 801 ntTSL 3 BASIC38.64■■■■□ 3.78
HMGXB3Q12766 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC38.64■■■■□ 3.78
HMGXB3Q12766 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC38.64■■■■□ 3.78
HMGXB3Q12766 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC38.64■■■■□ 3.78
HMGXB3Q12766 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
HMGXB3Q12766 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC38.64■■■■□ 3.78
HMGXB3Q12766 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.78
HMGXB3Q12766 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC38.63■■■■□ 3.78
HMGXB3Q12766 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.78
HMGXB3Q12766 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC38.63■■■■□ 3.78
HMGXB3Q12766 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC38.63■■■■□ 3.78
HMGXB3Q12766 EEF1DP3-203ENST00000566025 782 ntBASIC38.63■■■■□ 3.78
HMGXB3Q12766 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC38.63■■■■□ 3.78
HMGXB3Q12766 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC38.63■■■■□ 3.78
HMGXB3Q12766 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC38.63■■■■□ 3.78
HMGXB3Q12766 USP36-216ENST00000589424 970 ntTSL 5 BASIC38.63■■■■□ 3.78
HMGXB3Q12766 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC38.63■■■■□ 3.77
HMGXB3Q12766 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
HMGXB3Q12766 RPS2P4-201ENST00000476944 856 ntBASIC38.63■■■■□ 3.77
HMGXB3Q12766 AC091874.3-201ENST00000512672 1195 ntBASIC38.63■■■■□ 3.77
HMGXB3Q12766 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC38.63■■■■□ 3.77
HMGXB3Q12766 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC38.62■■■■□ 3.77
HMGXB3Q12766 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
HMGXB3Q12766 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC38.62■■■■□ 3.77
HMGXB3Q12766 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC38.62■■■■□ 3.77
HMGXB3Q12766 AC142381.4-202ENST00000563973 229 ntBASIC38.62■■■■□ 3.77
HMGXB3Q12766 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
HMGXB3Q12766 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
HMGXB3Q12766 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC38.61■■■■□ 3.77
HMGXB3Q12766 BX276092.2-201ENST00000417668 665 ntBASIC38.61■■■■□ 3.77
HMGXB3Q12766 AL158047.1-201ENST00000445918 881 ntBASIC38.61■■■■□ 3.77
HMGXB3Q12766 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC38.61■■■■□ 3.77
HMGXB3Q12766 AC128676.1-201ENST00000454392 318 ntBASIC38.61■■■■□ 3.77
HMGXB3Q12766 UNC93B4-201ENST00000505679 747 ntBASIC38.61■■■■□ 3.77
HMGXB3Q12766 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC38.61■■■■□ 3.77
HMGXB3Q12766 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
HMGXB3Q12766 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC38.61■■■■□ 3.77
HMGXB3Q12766 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
HMGXB3Q12766 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
HMGXB3Q12766 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC38.6■■■■□ 3.77
HMGXB3Q12766 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC38.6■■■■□ 3.77
HMGXB3Q12766 NAA20-201ENST00000310450 920 ntTSL 2 BASIC38.6■■■■□ 3.77
HMGXB3Q12766 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC38.6■■■■□ 3.77
HMGXB3Q12766 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC38.6■■■■□ 3.77
HMGXB3Q12766 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC38.6■■■■□ 3.77
HMGXB3Q12766 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC38.6■■■■□ 3.77
HMGXB3Q12766 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC38.59■■■■□ 3.77
HMGXB3Q12766 BMP1-204ENST00000397814 836 ntTSL 4 BASIC38.59■■■■□ 3.77
HMGXB3Q12766 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC38.59■■■■□ 3.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms