Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 RAD14YMR201C 1116 nt3.67□□□□□ -1.82
RUP1Q12242 UBS1YBR165W 834 nt3.67□□□□□ -1.82
RUP1Q12242 YCL001W-AYCL001W-A 462 nt3.67□□□□□ -1.82
RUP1Q12242 ALA1YOR335C 2877 nt3.67□□□□□ -1.82
RUP1Q12242 YRM1YOR172W 2361 nt3.67□□□□□ -1.82
RUP1Q12242 LOS1YKL205W 3303 nt3.67□□□□□ -1.82
RUP1Q12242 MGA1YGR249W 1371 nt3.66□□□□□ -1.82
RUP1Q12242 TRX3YCR083W 384 nt3.66□□□□□ -1.82
RUP1Q12242 AIM6YDL237W 1173 nt3.66□□□□□ -1.82
RUP1Q12242 RCR2YDR003W 633 nt3.66□□□□□ -1.82
RUP1Q12242 OKP1YGR179C 1221 nt3.66□□□□□ -1.82
RUP1Q12242 YHI9YHR029C 885 nt3.66□□□□□ -1.82
RUP1Q12242 tV(CAC)DtV(CAC)D 73 nt3.66□□□□□ -1.82
RUP1Q12242 tV(CAC)HtV(CAC)H 73 nt3.66□□□□□ -1.82
RUP1Q12242 BAG7YOR134W 1230 nt3.66□□□□□ -1.82
RUP1Q12242 YPL168WYPL168W 1293 nt3.66□□□□□ -1.82
RUP1Q12242 HPA2YPR193C 471 nt3.66□□□□□ -1.82
RUP1Q12242 ROD1YOR018W 2514 nt3.65□□□□□ -1.83
RUP1Q12242 PRP3YDR473C 1410 nt3.65□□□□□ -1.83
RUP1Q12242 YCR024C-BYCR024C-B 267 nt3.65□□□□□ -1.83
RUP1Q12242 YOS1YER074W-A 258 nt3.65□□□□□ -1.83
RUP1Q12242 SPT4YGR063C 309 nt3.65□□□□□ -1.83
RUP1Q12242 YGR168CYGR168C 1131 nt3.65□□□□□ -1.83
RUP1Q12242 YHR173CYHR173C 339 nt3.65□□□□□ -1.83
RUP1Q12242 GVP36YIL041W 981 nt3.65□□□□□ -1.83
RUP1Q12242 PCL7YIL050W 858 nt3.65□□□□□ -1.83
RUP1Q12242 SOD1YJR104C 465 nt3.65□□□□□ -1.83
RUP1Q12242 YLR311CYLR311C 348 nt3.65□□□□□ -1.83
RUP1Q12242 POP8YBL018C 402 nt3.65□□□□□ -1.83
RUP1Q12242 SHH3YMR118C 591 nt3.65□□□□□ -1.83
RUP1Q12242 RUF21RUF21 707 nt3.65□□□□□ -1.83
RUP1Q12242 SIL1YOL031C 1266 nt3.65□□□□□ -1.83
RUP1Q12242 LDS2YOL047C 1071 nt3.65□□□□□ -1.83
RUP1Q12242 GEM1YAL048C 1989 nt3.65□□□□□ -1.83
RUP1Q12242 MTH1YDR277C 1302 nt3.65□□□□□ -1.83
RUP1Q12242 PPQ1YPL179W 1650 nt3.65□□□□□ -1.83
RUP1Q12242 RRP5YMR229C 5190 nt3.64□□□□□ -1.83
RUP1Q12242 NOG1YPL093W 1944 nt3.64□□□□□ -1.83
RUP1Q12242 DBP5YOR046C 1449 nt3.64□□□□□ -1.83
RUP1Q12242 MSW1YDR268W 1140 nt3.64□□□□□ -1.83
RUP1Q12242 ISC10YER180C 804 nt3.64□□□□□ -1.83
RUP1Q12242 CNN1YFR046C 1086 nt3.64□□□□□ -1.83
RUP1Q12242 YHR022CYHR022C 771 nt3.64□□□□□ -1.83
RUP1Q12242 SAW1YAL027W 786 nt3.64□□□□□ -1.83
RUP1Q12242 LDH1YBR204C 1128 nt3.64□□□□□ -1.83
RUP1Q12242 SER3YER081W 1410 nt3.63□□□□□ -1.83
RUP1Q12242 CWC2YDL209C 1020 nt3.63□□□□□ -1.83
RUP1Q12242 YDR124WYDR124W 975 nt3.63□□□□□ -1.83
RUP1Q12242 CPR1YDR155C 489 nt3.63□□□□□ -1.83
RUP1Q12242 YHL026CYHL026C 948 nt3.63□□□□□ -1.83
RUP1Q12242 DPH1YIL103W 1278 nt3.63□□□□□ -1.83
RUP1Q12242 YJR096WYJR096W 849 nt3.63□□□□□ -1.83
RUP1Q12242 SRP40YKR092C 1221 nt3.63□□□□□ -1.83
RUP1Q12242 FLD1YLR404W 858 nt3.63□□□□□ -1.83
RUP1Q12242 RSF1YMR030W 1131 nt3.63□□□□□ -1.83
RUP1Q12242 RPN8YOR261C 1017 nt3.63□□□□□ -1.83
RUP1Q12242 RTT109YLL002W 1311 nt3.63□□□□□ -1.83
RUP1Q12242 KRE5YOR336W 4098 nt3.63□□□□□ -1.83
RUP1Q12242 TED1YIL039W 1422 nt3.62□□□□□ -1.83
RUP1Q12242 RNT1YMR239C 1416 nt3.62□□□□□ -1.83
RUP1Q12242 YOL019WYOL019W 1656 nt3.62□□□□□ -1.83
RUP1Q12242 TCB3YML072C 4638 nt3.62□□□□□ -1.83
RUP1Q12242 ACA1YER045C 1470 nt3.62□□□□□ -1.83
RUP1Q12242 RDI1YDL135C 609 nt3.62□□□□□ -1.83
RUP1Q12242 YDR464C-AYDR464C-A 189 nt3.62□□□□□ -1.83
RUP1Q12242 PPE1YHR075C 1203 nt3.62□□□□□ -1.83
RUP1Q12242 YJR071WYJR071W 369 nt3.62□□□□□ -1.83
RUP1Q12242 ASI2YNL159C 870 nt3.62□□□□□ -1.83
RUP1Q12242 SSP2YOR242C 1116 nt3.62□□□□□ -1.83
RUP1Q12242 TFB6YOR352W 1032 nt3.62□□□□□ -1.83
RUP1Q12242 USV1YPL230W 1176 nt3.62□□□□□ -1.83
RUP1Q12242 RPS9BYBR189W 588 nt3.62□□□□□ -1.83
RUP1Q12242 SPT16YGL207W 3108 nt3.62□□□□□ -1.83
RUP1Q12242 APN2YBL019W 1563 nt3.62□□□□□ -1.83
RUP1Q12242 LTV1YKL143W 1392 nt3.62□□□□□ -1.83
RUP1Q12242 DSL1YNL258C 2265 nt3.61□□□□□ -1.83
RUP1Q12242 EPO1YMR124W 2832 nt3.61□□□□□ -1.83
RUP1Q12242 FAP7YDL166C 594 nt3.61□□□□□ -1.83
RUP1Q12242 CAB2YIL083C 1098 nt3.61□□□□□ -1.83
RUP1Q12242 PET130YJL023C 1044 nt3.61□□□□□ -1.83
RUP1Q12242 CDC8YJR057W 651 nt3.61□□□□□ -1.83
RUP1Q12242 GAB1YLR459W 1185 nt3.61□□□□□ -1.83
RUP1Q12242 IDH2YOR136W 1110 nt3.61□□□□□ -1.83
RUP1Q12242 YBR096WYBR096W 693 nt3.61□□□□□ -1.83
RUP1Q12242 POF1YCL047C 777 nt3.61□□□□□ -1.83
RUP1Q12242 MDN1YLR106C 14733 nt3.61□□□□□ -1.83
RUP1Q12242 YGR117CYGR117C 1431 nt3.61□□□□□ -1.83
RUP1Q12242 RPN4YDL020C 1596 nt3.6□□□□□ -1.83
RUP1Q12242 PLM2YDR501W 1566 nt3.6□□□□□ -1.83
RUP1Q12242 PRP11YDL043C 801 nt3.6□□□□□ -1.83
RUP1Q12242 REE1YJL217W 597 nt3.6□□□□□ -1.83
RUP1Q12242 YJR037WYJR037W 384 nt3.6□□□□□ -1.83
RUP1Q12242 YML047W-AYML047W-A 366 nt3.6□□□□□ -1.83
RUP1Q12242 RIM11YMR139W 1113 nt3.6□□□□□ -1.83
RUP1Q12242 VAM3YOR106W 852 nt3.6□□□□□ -1.83
RUP1Q12242 YOR114WYOR114W 885 nt3.6□□□□□ -1.83
RUP1Q12242 YOR263CYOR263C 408 nt3.6□□□□□ -1.83
RUP1Q12242 SUT2YPR009W 807 nt3.6□□□□□ -1.83
RUP1Q12242 YPR074W-AYPR074W-A 171 nt3.6□□□□□ -1.83
RUP1Q12242 RRP7YCL031C 894 nt3.6□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 22.9 ms