Protein–RNA interactions for Protein: Q06688

BER1, SRR1-like protein BER1, yeast

Known RBP Predictions only

Length 274 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
BER1	Q06688	YHL026C	YHL026C	948 nt		3.19	□□□□□ -1.9
BER1	Q06688	ENT3	YJR125C	1227 nt		3.19	□□□□□ -1.9
BER1	Q06688	BUR2	YLR226W	1188 nt		3.19	□□□□□ -1.9
BER1	Q06688	CCS1	YMR038C	750 nt		3.19	□□□□□ -1.9
BER1	Q06688	YMR105W-A	YMR105W-A	195 nt		3.19	□□□□□ -1.9
BER1	Q06688	RAD14	YMR201C	1116 nt		3.19	□□□□□ -1.9
BER1	Q06688	CPR8	YNR028W	927 nt		3.19	□□□□□ -1.9
BER1	Q06688	LDS2	YOL047C	1071 nt		3.19	□□□□□ -1.9
BER1	Q06688	YBR016W	YBR016W	387 nt		3.19	□□□□□ -1.9
BER1	Q06688	YOR263C	YOR263C	408 nt		3.19	□□□□□ -1.9
BER1	Q06688	RRP36	YOR287C	903 nt		3.19	□□□□□ -1.9
BER1	Q06688	YPL168W	YPL168W	1293 nt		3.19	□□□□□ -1.9
BER1	Q06688	BCS1	YDR375C	1371 nt		3.19	□□□□□ -1.9
BER1	Q06688	YPL109C	YPL109C	1974 nt		3.19	□□□□□ -1.9
BER1	Q06688	RSF2	YJR127C	4143 nt		3.19	□□□□□ -1.9
BER1	Q06688	MTR4	YJL050W	3222 nt		3.19	□□□□□ -1.9
BER1	Q06688	ERG5	YMR015C	1617 nt		3.19	□□□□□ -1.9
BER1	Q06688	RAD4	YER162C	2265 nt		3.18	□□□□□ -1.9
BER1	Q06688	BAR1	YIL015W	1764 nt		3.18	□□□□□ -1.9
BER1	Q06688	TRX3	YCR083W	384 nt		3.18	□□□□□ -1.9
BER1	Q06688	tV(CAC)D	tV(CAC)D	73 nt		3.18	□□□□□ -1.9
BER1	Q06688	tV(CAC)H	tV(CAC)H	73 nt		3.18	□□□□□ -1.9
BER1	Q06688	YIL171W-A	YIL171W-A	453 nt		3.18	□□□□□ -1.9
BER1	Q06688	MRPL49	YJL096W	486 nt		3.18	□□□□□ -1.9
BER1	Q06688	YJL220W	YJL220W	453 nt		3.18	□□□□□ -1.9
BER1	Q06688	YKT6	YKL196C	603 nt		3.18	□□□□□ -1.9
BER1	Q06688	YNL296W	YNL296W	315 nt		3.18	□□□□□ -1.9
BER1	Q06688	PFK27	YOL136C	1194 nt		3.18	□□□□□ -1.9
BER1	Q06688	OXR1	YPL196W	822 nt		3.18	□□□□□ -1.9
BER1	Q06688	YPR136C	YPR136C	513 nt		3.18	□□□□□ -1.9
BER1	Q06688	TRM1	YDR120C	1713 nt		3.18	□□□□□ -1.9
BER1	Q06688	CTM1	YHR109W	1758 nt		3.17	□□□□□ -1.9
BER1	Q06688	STP1	YDR463W	1560 nt		3.17	□□□□□ -1.9
BER1	Q06688	FAR8	YMR029C	1572 nt		3.17	□□□□□ -1.9
BER1	Q06688	SSM4	YIL030C	3960 nt		3.17	□□□□□ -1.9
BER1	Q06688	AEP3	YPL005W	1821 nt		3.17	□□□□□ -1.9
BER1	Q06688	BSC2	YDR275W	708 nt		3.17	□□□□□ -1.9
BER1	Q06688	YFT2	YDR319C	825 nt		3.17	□□□□□ -1.9
BER1	Q06688	YHL045W	YHL045W	348 nt		3.17	□□□□□ -1.9
BER1	Q06688	LSM1	YJL124C	519 nt		3.17	□□□□□ -1.9
BER1	Q06688	YAR075W	YAR075W	474 nt		3.17	□□□□□ -1.9
BER1	Q06688	SHH3	YMR118C	591 nt		3.17	□□□□□ -1.9
BER1	Q06688	YOL024W	YOL024W	519 nt		3.17	□□□□□ -1.9
BER1	Q06688	YPL162C	YPL162C	822 nt		3.17	□□□□□ -1.9
BER1	Q06688	POS5	YPL188W	1245 nt		3.17	□□□□□ -1.9
BER1	Q06688	USA1	YML029W	2517 nt		3.17	□□□□□ -1.9
BER1	Q06688	RNR1	YER070W	2667 nt		3.16	□□□□□ -1.9
BER1	Q06688	PWP2	YCR057C	2772 nt		3.16	□□□□□ -1.9
BER1	Q06688	QRI7	YDL104C	1224 nt		3.16	□□□□□ -1.9
BER1	Q06688	YDL162C	YDL162C	357 nt		3.16	□□□□□ -1.9
BER1	Q06688	YDL241W	YDL241W	372 nt		3.16	□□□□□ -1.9
BER1	Q06688	KXD1	YGL079W	657 nt		3.16	□□□□□ -1.9
BER1	Q06688	AML1	YGR001C	747 nt		3.16	□□□□□ -1.9
BER1	Q06688	YHR214C-E	YHR214C-E	300 nt		3.16	□□□□□ -1.9
BER1	Q06688	YAR070C	YAR070C	300 nt		3.16	□□□□□ -1.9
BER1	Q06688	RPP0	YLR340W	939 nt		3.16	□□□□□ -1.9
BER1	Q06688	OCA2	YNL056W	594 nt		3.16	□□□□□ -1.9
BER1	Q06688	CAF20	YOR276W	486 nt		3.16	□□□□□ -1.9
BER1	Q06688	MRPL51	YPR100W	423 nt		3.16	□□□□□ -1.9
BER1	Q06688	SAF1	YBR280C	1914 nt		3.16	□□□□□ -1.9
BER1	Q06688	TOP1	YOL006C	2310 nt		3.16	□□□□□ -1.9
BER1	Q06688	FLO9	YAL063C	3969 nt		3.16	□□□□□ -1.9
BER1	Q06688	RTT109	YLL002W	1311 nt		3.16	□□□□□ -1.9
BER1	Q06688	LOS1	YKL205W	3303 nt		3.16	□□□□□ -1.9
BER1	Q06688	TRS120	YDR407C	3870 nt		3.16	□□□□□ -1.9
BER1	Q06688	KIN2	YLR096W	3444 nt		3.15	□□□□□ -1.9
BER1	Q06688	YPR022C	YPR022C	3402 nt		3.15	□□□□□ -1.9
BER1	Q06688	NOG1	YPL093W	1944 nt		3.15	□□□□□ -1.9
BER1	Q06688	SNQ2	YDR011W	4506 nt		3.15	□□□□□ -1.91
BER1	Q06688	RMD5	YDR255C	1266 nt		3.15	□□□□□ -1.91
BER1	Q06688	DPH1	YIL103W	1278 nt		3.15	□□□□□ -1.91
BER1	Q06688	HUB1	YNR032C-A	222 nt		3.15	□□□□□ -1.91
BER1	Q06688	YBL096C	YBL096C	309 nt		3.15	□□□□□ -1.91
BER1	Q06688	IZH2	YOL002C	954 nt		3.15	□□□□□ -1.91
BER1	Q06688	YPR077C	YPR077C	372 nt		3.15	□□□□□ -1.91
BER1	Q06688	APN2	YBL019W	1563 nt		3.15	□□□□□ -1.91
BER1	Q06688	ACK1	YDL203C	1872 nt		3.15	□□□□□ -1.91
BER1	Q06688	RSM23	YGL129C	1353 nt		3.14	□□□□□ -1.91
BER1	Q06688	TRM12	YML005W	1389 nt		3.14	□□□□□ -1.91
BER1	Q06688	TMA108	YIL137C	2841 nt		3.14	□□□□□ -1.91
BER1	Q06688	ROD1	YOR018W	2514 nt		3.14	□□□□□ -1.91
BER1	Q06688	YDR355C	YDR355C	303 nt		3.14	□□□□□ -1.91
BER1	Q06688	ADH4	YGL256W	1149 nt		3.14	□□□□□ -1.91
BER1	Q06688	YJR037W	YJR037W	384 nt		3.14	□□□□□ -1.91
BER1	Q06688	NIT3	YLR351C	876 nt		3.14	□□□□□ -1.91
BER1	Q06688	ATG33	YLR356W	594 nt		3.14	□□□□□ -1.91
BER1	Q06688	RPS9B	YBR189W	588 nt		3.14	□□□□□ -1.91
BER1	Q06688	RPN2	YIL075C	2838 nt		3.14	□□□□□ -1.91
BER1	Q06688	GCN1	YGL195W	8019 nt		3.13	□□□□□ -1.91
BER1	Q06688	AEP2	YMR282C	1743 nt		3.13	□□□□□ -1.91
BER1	Q06688	YDR089W	YDR089W	2610 nt		3.13	□□□□□ -1.91
BER1	Q06688	SQS1	YNL224C	2304 nt		3.13	□□□□□ -1.91
BER1	Q06688	YCR015C	YCR015C	954 nt		3.13	□□□□□ -1.91
BER1	Q06688	YDR222W	YDR222W	1248 nt		3.13	□□□□□ -1.91
BER1	Q06688	YFL065C	YFL065C	309 nt		3.13	□□□□□ -1.91
BER1	Q06688	YIR014W	YIR014W	729 nt		3.13	□□□□□ -1.91
BER1	Q06688	CDC8	YJR057W	651 nt		3.13	□□□□□ -1.91
BER1	Q06688	ACP1	YKL192C	378 nt		3.13	□□□□□ -1.91
BER1	Q06688	TVP18	YMR071C	504 nt		3.13	□□□□□ -1.91
BER1	Q06688	MDJ2	YNL328C	441 nt		3.13	□□□□□ -1.91

Retrieved 100 of 7,029 protein–RNA pairs in 16 ms