Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 MMT1YMR177W 1533 nt4.66□□□□□ -1.66
SSL2Q00578 URC2YDR520C 2319 nt4.66□□□□□ -1.66
SSL2Q00578 ALR2YFL050C 2577 nt4.65□□□□□ -1.66
SSL2Q00578 PUF2YPR042C 3228 nt4.65□□□□□ -1.66
SSL2Q00578 SLI1YGR212W 1407 nt4.65□□□□□ -1.66
SSL2Q00578 YAP6YDR259C 1152 nt4.65□□□□□ -1.67
SSL2Q00578 EMC4YGL231C 573 nt4.65□□□□□ -1.67
SSL2Q00578 YIL025CYIL025C 375 nt4.65□□□□□ -1.67
SSL2Q00578 PCL7YIL050W 858 nt4.65□□□□□ -1.67
SSL2Q00578 YKL177WYKL177W 339 nt4.65□□□□□ -1.67
SSL2Q00578 FMP46YKR049C 402 nt4.65□□□□□ -1.67
SSL2Q00578 RFU1YLR073C 603 nt4.65□□□□□ -1.67
SSL2Q00578 TRI1YMR233W 681 nt4.65□□□□□ -1.67
SSL2Q00578 YBR016WYBR016W 387 nt4.65□□□□□ -1.67
SSL2Q00578 CIK1YMR198W 1785 nt4.65□□□□□ -1.67
SSL2Q00578 RPN4YDL020C 1596 nt4.65□□□□□ -1.67
SSL2Q00578 HPR1YDR138W 2259 nt4.65□□□□□ -1.67
SSL2Q00578 GIP4YAL031C 2283 nt4.65□□□□□ -1.67
SSL2Q00578 YHR202WYHR202W 1809 nt4.65□□□□□ -1.67
SSL2Q00578 UTP5YDR398W 1932 nt4.64□□□□□ -1.67
SSL2Q00578 YGL041W-AYGL041W-A 465 nt4.64□□□□□ -1.67
SSL2Q00578 PRP18YGR006W 756 nt4.64□□□□□ -1.67
SSL2Q00578 SRB5YGR104C 924 nt4.64□□□□□ -1.67
SSL2Q00578 PEX18YHR160C 852 nt4.64□□□□□ -1.67
SSL2Q00578 BUD21YOR078W 645 nt4.64□□□□□ -1.67
SSL2Q00578 FIG1YBR040W 897 nt4.64□□□□□ -1.67
SSL2Q00578 SUR1YPL057C 1149 nt4.64□□□□□ -1.67
SSL2Q00578 YPL278CYPL278C 303 nt4.64□□□□□ -1.67
SSL2Q00578 YPK9YOR291W 4419 nt4.64□□□□□ -1.67
SSL2Q00578 ALG11YNL048W 1647 nt4.64□□□□□ -1.67
SSL2Q00578 PFK1YGR240C 2964 nt4.63□□□□□ -1.67
SSL2Q00578 YCR108CYCR108C 192 nt4.63□□□□□ -1.67
SSL2Q00578 BCP1YDR361C 852 nt4.63□□□□□ -1.67
SSL2Q00578 SWD2YKL018W 990 nt4.63□□□□□ -1.67
SSL2Q00578 YNR061CYNR061C 660 nt4.63□□□□□ -1.67
SSL2Q00578 YOR238WYOR238W 912 nt4.63□□□□□ -1.67
SSL2Q00578 YPR147CYPR147C 915 nt4.63□□□□□ -1.67
SSL2Q00578 YCL007CYCL007C 393 nt4.63□□□□□ -1.67
SSL2Q00578 RAD1YPL022W 3303 nt4.63□□□□□ -1.67
SSL2Q00578 TRS85YDR108W 2097 nt4.63□□□□□ -1.67
SSL2Q00578 LYP1YNL268W 1836 nt4.62□□□□□ -1.67
SSL2Q00578 BCH2YKR027W 2298 nt4.62□□□□□ -1.67
SSL2Q00578 NCR1YPL006W 3513 nt4.62□□□□□ -1.67
SSL2Q00578 GCR1YPL075W 2358 nt4.62□□□□□ -1.67
SSL2Q00578 PHO87YCR037C 2772 nt4.62□□□□□ -1.67
SSL2Q00578 PDS1YDR113C 1122 nt4.62□□□□□ -1.67
SSL2Q00578 SPR6YER115C 576 nt4.62□□□□□ -1.67
SSL2Q00578 BUD19YJL188C 309 nt4.62□□□□□ -1.67
SSL2Q00578 ACP1YKL192C 378 nt4.62□□□□□ -1.67
SSL2Q00578 YMR099CYMR099C 894 nt4.62□□□□□ -1.67
SSL2Q00578 RNA1YMR235C 1224 nt4.62□□□□□ -1.67
SSL2Q00578 GAL7YBR018C 1101 nt4.62□□□□□ -1.67
SSL2Q00578 CUP9YPL177C 921 nt4.62□□□□□ -1.67
SSL2Q00578 VPS69YPR087W 321 nt4.62□□□□□ -1.67
SSL2Q00578 ARX1YDR101C 1782 nt4.62□□□□□ -1.67
SSL2Q00578 RPB2YOR151C 3675 nt4.62□□□□□ -1.67
SSL2Q00578 SEN1YLR430W 6696 nt4.62□□□□□ -1.67
SSL2Q00578 PTR3YFR029W 2037 nt4.62□□□□□ -1.67
SSL2Q00578 SSH4YKL124W 1740 nt4.61□□□□□ -1.67
SSL2Q00578 YDR203WYDR203W 318 nt4.61□□□□□ -1.67
SSL2Q00578 OST5YGL226C-A 261 nt4.61□□□□□ -1.67
SSL2Q00578 YGR226CYGR226C 210 nt4.61□□□□□ -1.67
SSL2Q00578 YHR175W-AYHR175W-A 150 nt4.61□□□□□ -1.67
SSL2Q00578 YJR157WYJR157W 363 nt4.61□□□□□ -1.67
SSL2Q00578 YMR187CYMR187C 1296 nt4.61□□□□□ -1.67
SSL2Q00578 YNL013CYNL013C 378 nt4.61□□□□□ -1.67
SSL2Q00578 UAF30YOR295W 687 nt4.61□□□□□ -1.67
SSL2Q00578 YOR314WYOR314W 330 nt4.61□□□□□ -1.67
SSL2Q00578 YBR056W-AYBR056W-A 201 nt4.61□□□□□ -1.67
SSL2Q00578 YPL162CYPL162C 822 nt4.61□□□□□ -1.67
SSL2Q00578 CIN2YPL241C 807 nt4.61□□□□□ -1.67
SSL2Q00578 STP22YCL008C 1158 nt4.61□□□□□ -1.67
SSL2Q00578 YIG1YPL201C 1386 nt4.61□□□□□ -1.67
SSL2Q00578 THS1YIL078W 2205 nt4.61□□□□□ -1.67
SSL2Q00578 CDC6YJL194W 1542 nt4.61□□□□□ -1.67
SSL2Q00578 RVS161YCR009C 798 nt4.6□□□□□ -1.67
SSL2Q00578 YDL016CYDL016C 303 nt4.6□□□□□ -1.67
SSL2Q00578 PTI1YGR156W 1278 nt4.6□□□□□ -1.67
SSL2Q00578 BIO2YGR286C 1128 nt4.6□□□□□ -1.67
SSL2Q00578 RPL27AYHR010W 411 nt4.6□□□□□ -1.67
SSL2Q00578 VMA22YHR060W 546 nt4.6□□□□□ -1.67
SSL2Q00578 SAE3YHR079C-A 276 nt4.6□□□□□ -1.67
SSL2Q00578 GLG2YJL137C 1143 nt4.6□□□□□ -1.67
SSL2Q00578 YML031C-AYML031C-A 336 nt4.6□□□□□ -1.67
SSL2Q00578 YMR158C-AYMR158C-A 138 nt4.6□□□□□ -1.67
SSL2Q00578 RGS2YOR107W 930 nt4.6□□□□□ -1.67
SSL2Q00578 TUM1YOR251C 915 nt4.6□□□□□ -1.67
SSL2Q00578 FDH2YPL275W 711 nt4.6□□□□□ -1.67
SSL2Q00578 BMT2YBR141C 1014 nt4.6□□□□□ -1.67
SSL2Q00578 ERG9YHR190W 1335 nt4.6□□□□□ -1.67
SSL2Q00578 ATG2YNL242W 4779 nt4.6□□□□□ -1.67
SSL2Q00578 FAS2YPL231W 5664 nt4.6□□□□□ -1.67
SSL2Q00578 MNN1YER001W 2289 nt4.6□□□□□ -1.67
SSL2Q00578 YDR524W-CYDR524W-C 90 nt4.59□□□□□ -1.67
SSL2Q00578 API2YDR525W 330 nt4.59□□□□□ -1.67
SSL2Q00578 YGR064WYGR064W 369 nt4.59□□□□□ -1.67
SSL2Q00578 COG2YGR120C 789 nt4.59□□□□□ -1.67
SSL2Q00578 GON7YJL184W 372 nt4.59□□□□□ -1.67
SSL2Q00578 AUR1YKL004W 1206 nt4.59□□□□□ -1.67
SSL2Q00578 YAR023CYAR023C 540 nt4.59□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms