Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
GABREP78334 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
GABREP78334 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.61■□□□□ 0.89
GABREP78334 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GABREP78334 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GABREP78334 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GABREP78334 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GABREP78334 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
GABREP78334 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.61■□□□□ 0.89
GABREP78334 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.61■□□□□ 0.89
GABREP78334 AP001160.3-201ENST00000601484 763 ntBASIC20.61■□□□□ 0.89
GABREP78334 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GABREP78334 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GABREP78334 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GABREP78334 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
GABREP78334 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GABREP78334 AF201337.1-201ENST00000520239 748 ntBASIC20.6■□□□□ 0.89
GABREP78334 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
GABREP78334 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.6■□□□□ 0.89
GABREP78334 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
GABREP78334 AC133041.1-202ENST00000642053 222 ntBASIC20.6■□□□□ 0.89
GABREP78334 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GABREP78334 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GABREP78334 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GABREP78334 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GABREP78334 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GABREP78334 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.59■□□□□ 0.89
GABREP78334 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GABREP78334 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.59■□□□□ 0.89
GABREP78334 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
GABREP78334 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GABREP78334 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.59■□□□□ 0.89
GABREP78334 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GABREP78334 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GABREP78334 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GABREP78334 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GABREP78334 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GABREP78334 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
GABREP78334 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GABREP78334 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
GABREP78334 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
GABREP78334 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GABREP78334 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.58■□□□□ 0.89
GABREP78334 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.58■□□□□ 0.89
GABREP78334 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GABREP78334 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.58■□□□□ 0.89
GABREP78334 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.58■□□□□ 0.89
GABREP78334 AC105036.2-201ENST00000569468 176 ntBASIC20.58■□□□□ 0.89
GABREP78334 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.58■□□□□ 0.89
GABREP78334 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
GABREP78334 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
GABREP78334 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GABREP78334 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
GABREP78334 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
GABREP78334 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.57■□□□□ 0.88
GABREP78334 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GABREP78334 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.57■□□□□ 0.88
GABREP78334 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
GABREP78334 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.57■□□□□ 0.88
GABREP78334 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.57■□□□□ 0.88
GABREP78334 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GABREP78334 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GABREP78334 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GABREP78334 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GABREP78334 LINC00543-201ENST00000567234 1845 ntBASIC20.56■□□□□ 0.88
GABREP78334 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GABREP78334 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.56■□□□□ 0.88
GABREP78334 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.56■□□□□ 0.88
GABREP78334 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GABREP78334 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GABREP78334 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GABREP78334 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
GABREP78334 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GABREP78334 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
GABREP78334 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.55■□□□□ 0.88
GABREP78334 AC093827.2-201ENST00000512654 315 ntBASIC20.55■□□□□ 0.88
GABREP78334 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.55■□□□□ 0.88
GABREP78334 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GABREP78334 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GABREP78334 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GABREP78334 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GABREP78334 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GABREP78334 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.54■□□□□ 0.88
GABREP78334 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
GABREP78334 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
GABREP78334 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GABREP78334 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GABREP78334 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
GABREP78334 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
GABREP78334 CNN2P6-201ENST00000439038 900 ntBASIC20.54■□□□□ 0.88
GABREP78334 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GABREP78334 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.54■□□□□ 0.88
GABREP78334 AC098934.4-201ENST00000564127 592 ntBASIC20.54■□□□□ 0.88
GABREP78334 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
GABREP78334 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GABREP78334 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GABREP78334 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
GABREP78334 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GABREP78334 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GABREP78334 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms