Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4XP62701 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4XP62701 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.55■□□□□ 0.72
RPS4XP62701 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.55■□□□□ 0.72
RPS4XP62701 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.55■□□□□ 0.72
RPS4XP62701 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.55■□□□□ 0.72
RPS4XP62701 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4XP62701 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4XP62701 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4XP62701 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
RPS4XP62701 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4XP62701 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
RPS4XP62701 AF213884.3-201ENST00000563833 479 ntBASIC19.54■□□□□ 0.72
RPS4XP62701 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4XP62701 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4XP62701 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4XP62701 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RPS4XP62701 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RPS4XP62701 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RPS4XP62701 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4XP62701 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.53■□□□□ 0.72
RPS4XP62701 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4XP62701 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RPS4XP62701 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RPS4XP62701 AC105265.2-201ENST00000467189 838 ntBASIC19.53■□□□□ 0.72
RPS4XP62701 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.53■□□□□ 0.72
RPS4XP62701 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.53■□□□□ 0.72
RPS4XP62701 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4XP62701 AC007375.3-201ENST00000600936 2314 ntBASIC19.53■□□□□ 0.72
RPS4XP62701 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RPS4XP62701 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4XP62701 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4XP62701 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RPS4XP62701 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4XP62701 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4XP62701 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.52■□□□□ 0.72
RPS4XP62701 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.52■□□□□ 0.72
RPS4XP62701 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4XP62701 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.52■□□□□ 0.72
RPS4XP62701 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4XP62701 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.52■□□□□ 0.72
RPS4XP62701 FAM99A-202ENST00000538190 1989 ntBASIC19.52■□□□□ 0.72
RPS4XP62701 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.52■□□□□ 0.72
RPS4XP62701 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4XP62701 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.52■□□□□ 0.72
RPS4XP62701 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4XP62701 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.52■□□□□ 0.72
RPS4XP62701 AC068587.7-201ENST00000641602 218 ntBASIC19.52■□□□□ 0.72
RPS4XP62701 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4XP62701 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4XP62701 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4XP62701 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4XP62701 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RPS4XP62701 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RPS4XP62701 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4XP62701 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4XP62701 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4XP62701 AC079089.2-201ENST00000531211 1277 ntBASIC19.51■□□□□ 0.71
RPS4XP62701 AL136967.2-201ENST00000623968 743 ntBASIC19.51■□□□□ 0.71
RPS4XP62701 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4XP62701 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4XP62701 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4XP62701 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4XP62701 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4XP62701 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4XP62701 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4XP62701 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4XP62701 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4XP62701 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.5■□□□□ 0.71
RPS4XP62701 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4XP62701 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4XP62701 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4XP62701 MIR939-201ENST00000401314 82 ntBASIC19.5■□□□□ 0.71
RPS4XP62701 AC091305.1-201ENST00000479476 895 ntBASIC19.5■□□□□ 0.71
RPS4XP62701 AP001330.3-201ENST00000520123 633 ntBASIC19.5■□□□□ 0.71
RPS4XP62701 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.5■□□□□ 0.71
RPS4XP62701 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.5■□□□□ 0.71
RPS4XP62701 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RPS4XP62701 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RPS4XP62701 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.5■□□□□ 0.71
RPS4XP62701 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.5■□□□□ 0.71
RPS4XP62701 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4XP62701 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RPS4XP62701 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4XP62701 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.49■□□□□ 0.71
RPS4XP62701 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4XP62701 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.49■□□□□ 0.71
RPS4XP62701 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4XP62701 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RPS4XP62701 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
RPS4XP62701 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4XP62701 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.49■□□□□ 0.71
RPS4XP62701 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.49■□□□□ 0.71
RPS4XP62701 AL138724.1-201ENST00000606771 1088 ntBASIC19.49■□□□□ 0.71
RPS4XP62701 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.49■□□□□ 0.71
RPS4XP62701 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.49■□□□□ 0.71
RPS4XP62701 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.49■□□□□ 0.71
RPS4XP62701 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
RPS4XP62701 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4XP62701 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms