Protein–RNA interactions for Protein: P61204

ARF3, ADP-ribosylation factor 3, humanhuman

Predicted RBP Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3P61204 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ARF3P61204 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARF3P61204 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARF3P61204 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.63■□□□□ 0.89
ARF3P61204 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARF3P61204 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARF3P61204 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARF3P61204 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARF3P61204 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ARF3P61204 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARF3P61204 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.62■□□□□ 0.89
ARF3P61204 AC123595.1-201ENST00000440769 1046 ntBASIC20.62■□□□□ 0.89
ARF3P61204 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.62■□□□□ 0.89
ARF3P61204 AC087623.3-201ENST00000607047 1098 ntBASIC20.62■□□□□ 0.89
ARF3P61204 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARF3P61204 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARF3P61204 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.62■□□□□ 0.89
ARF3P61204 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARF3P61204 AC080038.3-201ENST00000623346 1952 ntBASIC20.61■□□□□ 0.89
ARF3P61204 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARF3P61204 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ARF3P61204 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARF3P61204 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARF3P61204 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARF3P61204 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.61■□□□□ 0.89
ARF3P61204 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARF3P61204 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.61■□□□□ 0.89
ARF3P61204 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.61■□□□□ 0.89
ARF3P61204 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.61■□□□□ 0.89
ARF3P61204 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARF3P61204 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARF3P61204 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARF3P61204 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARF3P61204 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARF3P61204 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ARF3P61204 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARF3P61204 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.6■□□□□ 0.89
ARF3P61204 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.6■□□□□ 0.89
ARF3P61204 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.6■□□□□ 0.89
ARF3P61204 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ARF3P61204 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARF3P61204 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARF3P61204 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.6■□□□□ 0.89
ARF3P61204 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARF3P61204 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARF3P61204 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARF3P61204 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARF3P61204 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.59■□□□□ 0.89
ARF3P61204 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARF3P61204 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARF3P61204 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ARF3P61204 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.59■□□□□ 0.89
ARF3P61204 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ARF3P61204 TPRG1LP1-201ENST00000598702 760 ntBASIC20.59■□□□□ 0.89
ARF3P61204 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARF3P61204 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ARF3P61204 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARF3P61204 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.59■□□□□ 0.89
ARF3P61204 LINC02228-203ENST00000641970 1355 ntBASIC20.59■□□□□ 0.89
ARF3P61204 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARF3P61204 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.58■□□□□ 0.89
ARF3P61204 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARF3P61204 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARF3P61204 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.58■□□□□ 0.89
ARF3P61204 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARF3P61204 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARF3P61204 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARF3P61204 AC233723.2-201ENST00000623798 2106 ntBASIC20.58■□□□□ 0.89
ARF3P61204 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARF3P61204 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARF3P61204 AP004607.7-201ENST00000527152 1677 ntBASIC20.58■□□□□ 0.88
ARF3P61204 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ARF3P61204 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARF3P61204 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.57■□□□□ 0.88
ARF3P61204 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ARF3P61204 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARF3P61204 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ARF3P61204 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARF3P61204 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARF3P61204 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARF3P61204 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.57■□□□□ 0.88
ARF3P61204 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.57■□□□□ 0.88
ARF3P61204 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.57■□□□□ 0.88
ARF3P61204 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.57■□□□□ 0.88
ARF3P61204 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ARF3P61204 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARF3P61204 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARF3P61204 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARF3P61204 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARF3P61204 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.56■□□□□ 0.88
ARF3P61204 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARF3P61204 CCDC92B-201ENST00000575506 885 ntBASIC20.56■□□□□ 0.88
ARF3P61204 MIR5787-201ENST00000611784 55 ntBASIC20.56■□□□□ 0.88
ARF3P61204 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.56■□□□□ 0.88
ARF3P61204 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ARF3P61204 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARF3P61204 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.55■□□□□ 0.88
ARF3P61204 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ARF3P61204 AC133561.1-201ENST00000568600 2415 ntBASIC20.55■□□□□ 0.88
ARF3P61204 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms