Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 LINC00565-201ENST00000562710 2331 ntBASIC21.88■■□□□ 1.09
WNT3AP56704 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
WNT3AP56704 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
WNT3AP56704 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
WNT3AP56704 MIR939-201ENST00000401314 82 ntBASIC21.88■■□□□ 1.09
WNT3AP56704 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.88■■□□□ 1.09
WNT3AP56704 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.88■■□□□ 1.09
WNT3AP56704 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
WNT3AP56704 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
WNT3AP56704 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
WNT3AP56704 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
WNT3AP56704 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
WNT3AP56704 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
WNT3AP56704 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
WNT3AP56704 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
WNT3AP56704 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
WNT3AP56704 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
WNT3AP56704 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
WNT3AP56704 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
WNT3AP56704 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
WNT3AP56704 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
WNT3AP56704 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.87■■□□□ 1.09
WNT3AP56704 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
WNT3AP56704 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.87■■□□□ 1.09
WNT3AP56704 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
WNT3AP56704 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
WNT3AP56704 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
WNT3AP56704 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.86■■□□□ 1.09
WNT3AP56704 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
WNT3AP56704 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.86■■□□□ 1.09
WNT3AP56704 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
WNT3AP56704 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
WNT3AP56704 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
WNT3AP56704 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
WNT3AP56704 IGHV3-19-201ENST00000521488 291 ntBASIC21.86■■□□□ 1.09
WNT3AP56704 AL136967.2-201ENST00000623968 743 ntBASIC21.86■■□□□ 1.09
WNT3AP56704 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
WNT3AP56704 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
WNT3AP56704 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.86■■□□□ 1.09
WNT3AP56704 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.86■■□□□ 1.09
WNT3AP56704 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
WNT3AP56704 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
WNT3AP56704 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
WNT3AP56704 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
WNT3AP56704 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.85■■□□□ 1.09
WNT3AP56704 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
WNT3AP56704 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
WNT3AP56704 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.85■■□□□ 1.09
WNT3AP56704 SUDS3P1-201ENST00000505831 966 ntBASIC21.85■■□□□ 1.09
WNT3AP56704 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
WNT3AP56704 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
WNT3AP56704 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
WNT3AP56704 RASA4CP-201ENST00000424092 1398 ntBASIC21.85■■□□□ 1.09
WNT3AP56704 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
WNT3AP56704 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
WNT3AP56704 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
WNT3AP56704 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
WNT3AP56704 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
WNT3AP56704 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
WNT3AP56704 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.84■■□□□ 1.09
WNT3AP56704 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.84■■□□□ 1.09
WNT3AP56704 AC091305.1-201ENST00000479476 895 ntBASIC21.84■■□□□ 1.09
WNT3AP56704 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
WNT3AP56704 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
WNT3AP56704 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
WNT3AP56704 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
WNT3AP56704 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
WNT3AP56704 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
WNT3AP56704 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
WNT3AP56704 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
WNT3AP56704 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
WNT3AP56704 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
WNT3AP56704 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.83■■□□□ 1.09
WNT3AP56704 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.83■■□□□ 1.09
WNT3AP56704 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.83■■□□□ 1.09
WNT3AP56704 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
WNT3AP56704 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
WNT3AP56704 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
WNT3AP56704 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
WNT3AP56704 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.83■■□□□ 1.09
WNT3AP56704 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
WNT3AP56704 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.83■■□□□ 1.08
WNT3AP56704 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
WNT3AP56704 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
WNT3AP56704 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
WNT3AP56704 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
WNT3AP56704 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
WNT3AP56704 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
WNT3AP56704 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.82■■□□□ 1.08
WNT3AP56704 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
WNT3AP56704 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.82■■□□□ 1.08
WNT3AP56704 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
WNT3AP56704 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.82■■□□□ 1.08
WNT3AP56704 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
WNT3AP56704 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
WNT3AP56704 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
WNT3AP56704 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
WNT3AP56704 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.81■■□□□ 1.08
WNT3AP56704 TSPY26P-201ENST00000476365 1326 ntBASIC21.81■■□□□ 1.08
WNT3AP56704 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms