Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.88■□□□□ 0.77
PER3P56645 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PER3P56645 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PER3P56645 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PER3P56645 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.87■□□□□ 0.77
PER3P56645 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PER3P56645 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PER3P56645 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PER3P56645 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.87■□□□□ 0.77
PER3P56645 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PER3P56645 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PER3P56645 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.87■□□□□ 0.77
PER3P56645 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PER3P56645 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PER3P56645 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PER3P56645 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PER3P56645 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PER3P56645 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PER3P56645 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.87■□□□□ 0.77
PER3P56645 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.87■□□□□ 0.77
PER3P56645 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PER3P56645 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PER3P56645 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PER3P56645 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PER3P56645 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PER3P56645 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PER3P56645 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PER3P56645 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PER3P56645 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PER3P56645 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.86■□□□□ 0.77
PER3P56645 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.85■□□□□ 0.77
PER3P56645 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PER3P56645 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PER3P56645 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PER3P56645 LINC01529-204ENST00000636474 1715 ntBASIC19.85■□□□□ 0.77
PER3P56645 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PER3P56645 AC144652.1-201ENST00000609974 1624 ntBASIC19.85■□□□□ 0.77
PER3P56645 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PER3P56645 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PER3P56645 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.85■□□□□ 0.77
PER3P56645 OR2I1P-207ENST00000453522 948 ntBASIC19.85■□□□□ 0.77
PER3P56645 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.85■□□□□ 0.77
PER3P56645 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
PER3P56645 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.85■□□□□ 0.77
PER3P56645 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PER3P56645 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PER3P56645 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.84■□□□□ 0.77
PER3P56645 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PER3P56645 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.84■□□□□ 0.77
PER3P56645 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.84■□□□□ 0.77
PER3P56645 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PER3P56645 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PER3P56645 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PER3P56645 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.84■□□□□ 0.77
PER3P56645 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.84■□□□□ 0.77
PER3P56645 AP005435.1-201ENST00000529293 1178 ntBASIC19.84■□□□□ 0.77
PER3P56645 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.84■□□□□ 0.77
PER3P56645 AC105233.4-201ENST00000642045 216 ntBASIC19.84■□□□□ 0.77
PER3P56645 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PER3P56645 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.84■□□□□ 0.77
PER3P56645 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PER3P56645 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PER3P56645 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.84■□□□□ 0.77
PER3P56645 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.84■□□□□ 0.77
PER3P56645 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PER3P56645 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PER3P56645 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PER3P56645 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PER3P56645 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PER3P56645 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PER3P56645 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.83■□□□□ 0.77
PER3P56645 AC006015.1-201ENST00000429970 570 ntBASIC19.83■□□□□ 0.77
PER3P56645 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.83■□□□□ 0.77
PER3P56645 DUX4L4-201ENST00000566884 1269 ntBASIC19.83■□□□□ 0.77
PER3P56645 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PER3P56645 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PER3P56645 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PER3P56645 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PER3P56645 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.83■□□□□ 0.76
PER3P56645 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PER3P56645 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PER3P56645 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PER3P56645 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.83■□□□□ 0.76
PER3P56645 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PER3P56645 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PER3P56645 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.82■□□□□ 0.76
PER3P56645 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PER3P56645 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.82■□□□□ 0.76
PER3P56645 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.82■□□□□ 0.76
PER3P56645 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.82■□□□□ 0.76
PER3P56645 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.82■□□□□ 0.76
PER3P56645 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PER3P56645 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.82■□□□□ 0.76
PER3P56645 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PER3P56645 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.82■□□□□ 0.76
PER3P56645 AC026185.1-201ENST00000445748 174 ntBASIC19.82■□□□□ 0.76
PER3P56645 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.82■□□□□ 0.76
PER3P56645 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.82■□□□□ 0.76
PER3P56645 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.82■□□□□ 0.76
PER3P56645 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms