Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GFRA1P56159 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.43■□□□□ 0.7
GFRA1P56159 AC139530.1-201ENST00000575312 1977 ntBASIC19.43■□□□□ 0.7
GFRA1P56159 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFRA1P56159 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GFRA1P56159 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.43■□□□□ 0.7
GFRA1P56159 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GFRA1P56159 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFRA1P56159 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFRA1P56159 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GFRA1P56159 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFRA1P56159 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.43■□□□□ 0.7
GFRA1P56159 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
GFRA1P56159 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.43■□□□□ 0.7
GFRA1P56159 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GFRA1P56159 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
GFRA1P56159 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.42■□□□□ 0.7
GFRA1P56159 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
GFRA1P56159 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.42■□□□□ 0.7
GFRA1P56159 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GFRA1P56159 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.42■□□□□ 0.7
GFRA1P56159 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GFRA1P56159 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.42■□□□□ 0.7
GFRA1P56159 NTF6G-201ENST00000591094 616 ntBASIC19.42■□□□□ 0.7
GFRA1P56159 AC092666.2-201ENST00000613287 246 ntBASIC19.42■□□□□ 0.7
GFRA1P56159 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
GFRA1P56159 AP004607.7-201ENST00000527152 1677 ntBASIC19.42■□□□□ 0.7
GFRA1P56159 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.42■□□□□ 0.7
GFRA1P56159 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.42■□□□□ 0.7
GFRA1P56159 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA1P56159 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA1P56159 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA1P56159 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.41■□□□□ 0.7
GFRA1P56159 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GFRA1P56159 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GFRA1P56159 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA1P56159 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
GFRA1P56159 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
GFRA1P56159 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.41■□□□□ 0.7
GFRA1P56159 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.41■□□□□ 0.7
GFRA1P56159 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.41■□□□□ 0.7
GFRA1P56159 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.41■□□□□ 0.7
GFRA1P56159 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA1P56159 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA1P56159 AC127496.7-201ENST00000625110 1798 ntBASIC19.41■□□□□ 0.7
GFRA1P56159 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA1P56159 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA1P56159 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA1P56159 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA1P56159 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA1P56159 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.41■□□□□ 0.7
GFRA1P56159 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.41■□□□□ 0.7
GFRA1P56159 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA1P56159 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA1P56159 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
GFRA1P56159 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA1P56159 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA1P56159 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
GFRA1P56159 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA1P56159 AL034346.1-201ENST00000568244 1277 ntBASIC19.4■□□□□ 0.7
GFRA1P56159 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA1P56159 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA1P56159 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA1P56159 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA1P56159 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.4■□□□□ 0.7
GFRA1P56159 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.4■□□□□ 0.7
GFRA1P56159 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GFRA1P56159 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
GFRA1P56159 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GFRA1P56159 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GFRA1P56159 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
GFRA1P56159 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GFRA1P56159 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
GFRA1P56159 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
GFRA1P56159 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.39■□□□□ 0.69
GFRA1P56159 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GFRA1P56159 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.39■□□□□ 0.69
GFRA1P56159 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.39■□□□□ 0.69
GFRA1P56159 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GFRA1P56159 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GFRA1P56159 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
GFRA1P56159 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GFRA1P56159 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GFRA1P56159 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GFRA1P56159 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
GFRA1P56159 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GFRA1P56159 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
GFRA1P56159 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GFRA1P56159 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GFRA1P56159 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.38■□□□□ 0.69
GFRA1P56159 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GFRA1P56159 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
GFRA1P56159 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
GFRA1P56159 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.38■□□□□ 0.69
GFRA1P56159 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.38■□□□□ 0.69
GFRA1P56159 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.38■□□□□ 0.69
GFRA1P56159 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GFRA1P56159 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GFRA1P56159 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GFRA1P56159 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms