Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC31.31■■■□□ 2.6
CLTCL1P53675 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC31.31■■■□□ 2.6
CLTCL1P53675 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC31.31■■■□□ 2.6
CLTCL1P53675 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC31.3■■■□□ 2.6
CLTCL1P53675 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CLTCL1P53675 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CLTCL1P53675 METTL15-202ENST00000403099 795 ntTSL 5 BASIC31.29■■■□□ 2.6
CLTCL1P53675 SERP1-208ENST00000491660 830 ntTSL 2 BASIC31.29■■■□□ 2.6
CLTCL1P53675 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC31.29■■■□□ 2.6
CLTCL1P53675 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CLTCL1P53675 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC31.29■■■□□ 2.6
CLTCL1P53675 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
CLTCL1P53675 ABHD17AP1-201ENST00000358206 933 ntBASIC31.28■■■□□ 2.6
CLTCL1P53675 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CLTCL1P53675 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CLTCL1P53675 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC31.28■■■□□ 2.6
CLTCL1P53675 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
CLTCL1P53675 LINC00526-201ENST00000581067 1875 ntBASIC31.28■■■□□ 2.6
CLTCL1P53675 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CLTCL1P53675 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CLTCL1P53675 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CLTCL1P53675 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CLTCL1P53675 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CLTCL1P53675 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
CLTCL1P53675 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC31.27■■■□□ 2.6
CLTCL1P53675 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CLTCL1P53675 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CLTCL1P53675 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CLTCL1P53675 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CLTCL1P53675 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CLTCL1P53675 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC31.27■■■□□ 2.6
CLTCL1P53675 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC31.27■■■□□ 2.6
CLTCL1P53675 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CLTCL1P53675 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC31.27■■■□□ 2.6
CLTCL1P53675 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC31.27■■■□□ 2.6
CLTCL1P53675 AP006587.3-201ENST00000525742 1516 ntBASIC31.26■■■□□ 2.6
CLTCL1P53675 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
CLTCL1P53675 AP004607.7-201ENST00000527152 1677 ntBASIC31.26■■■□□ 2.59
CLTCL1P53675 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
CLTCL1P53675 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CLTCL1P53675 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CLTCL1P53675 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CLTCL1P53675 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CLTCL1P53675 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CLTCL1P53675 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CLTCL1P53675 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC31.25■■■□□ 2.59
CLTCL1P53675 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC31.25■■■□□ 2.59
CLTCL1P53675 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CLTCL1P53675 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
CLTCL1P53675 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CLTCL1P53675 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CLTCL1P53675 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC31.24■■■□□ 2.59
CLTCL1P53675 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC31.24■■■□□ 2.59
CLTCL1P53675 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CLTCL1P53675 THRA-202ENST00000394121 2260 ntTSL 2 BASIC31.24■■■□□ 2.59
CLTCL1P53675 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC31.24■■■□□ 2.59
CLTCL1P53675 BRI3-207ENST00000539286 699 ntTSL 2 BASIC31.24■■■□□ 2.59
CLTCL1P53675 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC31.24■■■□□ 2.59
CLTCL1P53675 AC098934.4-201ENST00000564127 592 ntBASIC31.24■■■□□ 2.59
CLTCL1P53675 AC138907.5-202ENST00000569484 235 ntBASIC31.24■■■□□ 2.59
CLTCL1P53675 AC142086.2-201ENST00000569753 217 ntBASIC31.24■■■□□ 2.59
CLTCL1P53675 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC31.23■■■□□ 2.59
CLTCL1P53675 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC31.23■■■□□ 2.59
CLTCL1P53675 AC231657.2-201ENST00000624556 255 ntBASIC31.23■■■□□ 2.59
CLTCL1P53675 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC31.23■■■□□ 2.59
CLTCL1P53675 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC31.22■■■□□ 2.59
CLTCL1P53675 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CLTCL1P53675 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC31.22■■■□□ 2.59
CLTCL1P53675 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC31.22■■■□□ 2.59
CLTCL1P53675 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC31.22■■■□□ 2.59
CLTCL1P53675 AP001160.3-201ENST00000601484 763 ntBASIC31.22■■■□□ 2.59
CLTCL1P53675 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
CLTCL1P53675 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CLTCL1P53675 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CLTCL1P53675 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CLTCL1P53675 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CLTCL1P53675 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CLTCL1P53675 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC31.21■■■□□ 2.59
CLTCL1P53675 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CLTCL1P53675 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CLTCL1P53675 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
CLTCL1P53675 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC31.21■■■□□ 2.59
CLTCL1P53675 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CLTCL1P53675 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC31.2■■■□□ 2.59
CLTCL1P53675 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CLTCL1P53675 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
CLTCL1P53675 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
CLTCL1P53675 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
CLTCL1P53675 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC31.2■■■□□ 2.59
CLTCL1P53675 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
CLTCL1P53675 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CLTCL1P53675 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.58
CLTCL1P53675 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC31.2■■■□□ 2.58
CLTCL1P53675 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC31.2■■■□□ 2.58
CLTCL1P53675 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC31.19■■■□□ 2.58
CLTCL1P53675 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
CLTCL1P53675 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC31.19■■■□□ 2.58
CLTCL1P53675 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CLTCL1P53675 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC31.19■■■□□ 2.58
CLTCL1P53675 EEF1DP3-203ENST00000566025 782 ntBASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms