Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.84■□□□□ 0.93
CLCN2P51788 AL353803.4-201ENST00000565882 1934 ntBASIC20.84■□□□□ 0.93
CLCN2P51788 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN2P51788 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN2P51788 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN2P51788 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN2P51788 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN2P51788 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN2P51788 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN2P51788 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.83■□□□□ 0.93
CLCN2P51788 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN2P51788 SERBP1P1-201ENST00000396021 1160 ntBASIC20.83■□□□□ 0.93
CLCN2P51788 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.83■□□□□ 0.93
CLCN2P51788 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLCN2P51788 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLCN2P51788 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLCN2P51788 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN2P51788 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.82■□□□□ 0.92
CLCN2P51788 AC019069.1-201ENST00000610008 1333 ntBASIC20.82■□□□□ 0.92
CLCN2P51788 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.82■□□□□ 0.92
CLCN2P51788 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.82■□□□□ 0.92
CLCN2P51788 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN2P51788 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN2P51788 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN2P51788 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.82■□□□□ 0.92
CLCN2P51788 FP325331.1-202ENST00000623531 1380 ntBASIC20.82■□□□□ 0.92
CLCN2P51788 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN2P51788 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN2P51788 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN2P51788 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.81■□□□□ 0.92
CLCN2P51788 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
CLCN2P51788 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.81■□□□□ 0.92
CLCN2P51788 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN2P51788 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.81■□□□□ 0.92
CLCN2P51788 AC006455.2-201ENST00000429931 906 ntBASIC20.81■□□□□ 0.92
CLCN2P51788 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
CLCN2P51788 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.81■□□□□ 0.92
CLCN2P51788 AC011298.3-201ENST00000615796 283 ntBASIC20.81■□□□□ 0.92
CLCN2P51788 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN2P51788 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN2P51788 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCN2P51788 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.81■□□□□ 0.92
CLCN2P51788 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN2P51788 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CLCN2P51788 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN2P51788 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CLCN2P51788 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.8■□□□□ 0.92
CLCN2P51788 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN2P51788 AC144652.1-201ENST00000609974 1624 ntBASIC20.8■□□□□ 0.92
CLCN2P51788 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN2P51788 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN2P51788 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.8■□□□□ 0.92
CLCN2P51788 AC005837.3-201ENST00000612163 286 ntBASIC20.8■□□□□ 0.92
CLCN2P51788 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.8■□□□□ 0.92
CLCN2P51788 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.8■□□□□ 0.92
CLCN2P51788 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLCN2P51788 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN2P51788 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.8■□□□□ 0.92
CLCN2P51788 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN2P51788 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CLCN2P51788 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN2P51788 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN2P51788 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN2P51788 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN2P51788 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN2P51788 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
CLCN2P51788 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN2P51788 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN2P51788 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN2P51788 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.79■□□□□ 0.92
CLCN2P51788 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.79■□□□□ 0.92
CLCN2P51788 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CLCN2P51788 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN2P51788 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CLCN2P51788 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN2P51788 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN2P51788 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CLCN2P51788 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN2P51788 EDA-201ENST00000338901 1233 ntBASIC20.78■□□□□ 0.92
CLCN2P51788 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.78■□□□□ 0.92
CLCN2P51788 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.78■□□□□ 0.92
CLCN2P51788 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN2P51788 pRNA.6-201ENST00000610482 90 ntBASIC20.78■□□□□ 0.92
CLCN2P51788 pRNA.5-201ENST00000612139 90 ntBASIC20.78■□□□□ 0.92
CLCN2P51788 pRNA.11-201ENST00000618423 90 ntBASIC20.78■□□□□ 0.92
CLCN2P51788 pRNA.13-201ENST00000619112 90 ntBASIC20.78■□□□□ 0.92
CLCN2P51788 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN2P51788 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.78■□□□□ 0.92
CLCN2P51788 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.78■□□□□ 0.92
CLCN2P51788 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLCN2P51788 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN2P51788 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CLCN2P51788 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
CLCN2P51788 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN2P51788 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN2P51788 LINC01521-201ENST00000504184 1943 ntBASIC20.77■□□□□ 0.92
CLCN2P51788 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.77■□□□□ 0.92
CLCN2P51788 MIR3181-201ENST00000578512 73 ntBASIC20.77■□□□□ 0.92
CLCN2P51788 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.77■□□□□ 0.92
CLCN2P51788 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms