Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
RAB28P51157 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RAB28P51157 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAB28P51157 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.89■□□□□ 0.94
RAB28P51157 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAB28P51157 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB28P51157 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB28P51157 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
RAB28P51157 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RAB28P51157 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RAB28P51157 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB28P51157 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB28P51157 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB28P51157 AC242852.2-201ENST00000615738 1807 ntBASIC20.89■□□□□ 0.93
RAB28P51157 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB28P51157 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RAB28P51157 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB28P51157 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB28P51157 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB28P51157 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RAB28P51157 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB28P51157 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
RAB28P51157 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
RAB28P51157 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB28P51157 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.88■□□□□ 0.93
RAB28P51157 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB28P51157 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB28P51157 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RAB28P51157 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB28P51157 AC123595.1-201ENST00000440769 1046 ntBASIC20.88■□□□□ 0.93
RAB28P51157 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB28P51157 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB28P51157 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB28P51157 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB28P51157 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB28P51157 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB28P51157 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB28P51157 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB28P51157 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB28P51157 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB28P51157 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB28P51157 AP004607.7-201ENST00000527152 1677 ntBASIC20.87■□□□□ 0.93
RAB28P51157 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB28P51157 RARRES2P6-201ENST00000567333 442 ntBASIC20.87■□□□□ 0.93
RAB28P51157 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB28P51157 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB28P51157 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB28P51157 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB28P51157 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB28P51157 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB28P51157 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB28P51157 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RAB28P51157 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB28P51157 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.86■□□□□ 0.93
RAB28P51157 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB28P51157 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB28P51157 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB28P51157 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB28P51157 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB28P51157 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB28P51157 AC097381.1-201ENST00000429019 1296 ntBASIC20.86■□□□□ 0.93
RAB28P51157 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.86■□□□□ 0.93
RAB28P51157 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RAB28P51157 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB28P51157 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RAB28P51157 TPRG1LP1-201ENST00000598702 760 ntBASIC20.86■□□□□ 0.93
RAB28P51157 MIR6821-201ENST00000617625 74 ntBASIC20.86■□□□□ 0.93
RAB28P51157 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB28P51157 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.86■□□□□ 0.93
RAB28P51157 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RAB28P51157 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB28P51157 AC009237.3-201ENST00000393279 1427 ntBASIC20.86■□□□□ 0.93
RAB28P51157 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RAB28P51157 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.85■□□□□ 0.93
RAB28P51157 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB28P51157 LINC02228-203ENST00000641970 1355 ntBASIC20.85■□□□□ 0.93
RAB28P51157 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB28P51157 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RAB28P51157 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RAB28P51157 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.85■□□□□ 0.93
RAB28P51157 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.85■□□□□ 0.93
RAB28P51157 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.85■□□□□ 0.93
RAB28P51157 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RAB28P51157 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB28P51157 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB28P51157 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB28P51157 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB28P51157 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB28P51157 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB28P51157 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
RAB28P51157 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.84■□□□□ 0.93
RAB28P51157 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
RAB28P51157 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB28P51157 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB28P51157 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB28P51157 AC026271.2-201ENST00000428091 497 ntBASIC20.84■□□□□ 0.93
RAB28P51157 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB28P51157 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB28P51157 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB28P51157 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms