Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX2P48431 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
SOX2P48431 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX2P48431 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX2P48431 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX2P48431 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX2P48431 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.97■□□□□ 0.63
SOX2P48431 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.97■□□□□ 0.63
SOX2P48431 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX2P48431 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SOX2P48431 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.97■□□□□ 0.63
SOX2P48431 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX2P48431 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX2P48431 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SOX2P48431 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SOX2P48431 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX2P48431 AC244015.2-201ENST00000616358 1861 ntBASIC18.97■□□□□ 0.63
SOX2P48431 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX2P48431 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.96■□□□□ 0.63
SOX2P48431 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SOX2P48431 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.96■□□□□ 0.63
SOX2P48431 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SOX2P48431 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX2P48431 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.96■□□□□ 0.63
SOX2P48431 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX2P48431 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX2P48431 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX2P48431 CA15P2-201ENST00000611168 834 ntBASIC18.96■□□□□ 0.63
SOX2P48431 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX2P48431 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SOX2P48431 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX2P48431 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX2P48431 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SOX2P48431 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX2P48431 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX2P48431 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SOX2P48431 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX2P48431 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SOX2P48431 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SOX2P48431 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX2P48431 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX2P48431 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.95■□□□□ 0.62
SOX2P48431 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX2P48431 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
SOX2P48431 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX2P48431 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
SOX2P48431 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX2P48431 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX2P48431 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOX2P48431 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.95■□□□□ 0.62
SOX2P48431 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SOX2P48431 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.94■□□□□ 0.62
SOX2P48431 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOX2P48431 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SOX2P48431 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SOX2P48431 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOX2P48431 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOX2P48431 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOX2P48431 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOX2P48431 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX2P48431 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX2P48431 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX2P48431 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SOX2P48431 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.93■□□□□ 0.62
SOX2P48431 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX2P48431 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.93■□□□□ 0.62
SOX2P48431 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SOX2P48431 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.93■□□□□ 0.62
SOX2P48431 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SOX2P48431 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SOX2P48431 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.93■□□□□ 0.62
SOX2P48431 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SOX2P48431 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOX2P48431 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SOX2P48431 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SOX2P48431 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
SOX2P48431 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SOX2P48431 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SOX2P48431 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SOX2P48431 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SOX2P48431 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SOX2P48431 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SOX2P48431 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SOX2P48431 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.92■□□□□ 0.62
SOX2P48431 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.92■□□□□ 0.62
SOX2P48431 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SOX2P48431 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SOX2P48431 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.92■□□□□ 0.62
SOX2P48431 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SOX2P48431 AC092028.1-203ENST00000608262 953 ntBASIC18.92■□□□□ 0.62
SOX2P48431 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.92■□□□□ 0.62
SOX2P48431 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SOX2P48431 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.91■□□□□ 0.62
SOX2P48431 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SOX2P48431 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SOX2P48431 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SOX2P48431 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SOX2P48431 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SOX2P48431 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SOX2P48431 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms