Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SDHAP31040 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SDHAP31040 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.36■□□□□ 0.69
SDHAP31040 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.36■□□□□ 0.69
SDHAP31040 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SDHAP31040 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SDHAP31040 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.36■□□□□ 0.69
SDHAP31040 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.36■□□□□ 0.69
SDHAP31040 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SDHAP31040 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.35■□□□□ 0.69
SDHAP31040 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SDHAP31040 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SDHAP31040 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.35■□□□□ 0.69
SDHAP31040 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
SDHAP31040 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SDHAP31040 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SDHAP31040 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SDHAP31040 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SDHAP31040 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SDHAP31040 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SDHAP31040 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SDHAP31040 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SDHAP31040 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.35■□□□□ 0.69
SDHAP31040 AC087239.1-201ENST00000622671 572 ntBASIC19.35■□□□□ 0.69
SDHAP31040 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SDHAP31040 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SDHAP31040 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.35■□□□□ 0.69
SDHAP31040 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.35■□□□□ 0.69
SDHAP31040 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SDHAP31040 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SDHAP31040 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.34■□□□□ 0.69
SDHAP31040 OR7E47P-201ENST00000546390 1422 ntBASIC19.34■□□□□ 0.69
SDHAP31040 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SDHAP31040 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SDHAP31040 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SDHAP31040 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SDHAP31040 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.34■□□□□ 0.69
SDHAP31040 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SDHAP31040 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SDHAP31040 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.34■□□□□ 0.69
SDHAP31040 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SDHAP31040 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.34■□□□□ 0.69
SDHAP31040 DUX4L19-201ENST00000557448 1267 ntBASIC19.34■□□□□ 0.69
SDHAP31040 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.34■□□□□ 0.69
SDHAP31040 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.34■□□□□ 0.69
SDHAP31040 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SDHAP31040 PKD1P6-201ENST00000343738 4769 ntBASIC19.34■□□□□ 0.69
SDHAP31040 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SDHAP31040 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SDHAP31040 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.33■□□□□ 0.69
SDHAP31040 AC244015.2-201ENST00000616358 1861 ntBASIC19.33■□□□□ 0.69
SDHAP31040 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SDHAP31040 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SDHAP31040 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SDHAP31040 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SDHAP31040 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.33■□□□□ 0.68
SDHAP31040 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SDHAP31040 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SDHAP31040 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.33■□□□□ 0.68
SDHAP31040 AL138724.1-201ENST00000606771 1088 ntBASIC19.33■□□□□ 0.68
SDHAP31040 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.33■□□□□ 0.68
SDHAP31040 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.33■□□□□ 0.68
SDHAP31040 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SDHAP31040 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SDHAP31040 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAP31040 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.32■□□□□ 0.68
SDHAP31040 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAP31040 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.32■□□□□ 0.68
SDHAP31040 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAP31040 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.32■□□□□ 0.68
SDHAP31040 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAP31040 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAP31040 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAP31040 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAP31040 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SDHAP31040 SYT6-210ENST00000641643 1587 ntBASIC19.32■□□□□ 0.68
SDHAP31040 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SDHAP31040 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SDHAP31040 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.31■□□□□ 0.68
SDHAP31040 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SDHAP31040 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.31■□□□□ 0.68
SDHAP31040 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SDHAP31040 AC010141.3-201ENST00000456659 717 ntBASIC19.31■□□□□ 0.68
SDHAP31040 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
SDHAP31040 MIR4466-201ENST00000606121 54 ntBASIC19.31■□□□□ 0.68
SDHAP31040 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SDHAP31040 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.31■□□□□ 0.68
SDHAP31040 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SDHAP31040 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SDHAP31040 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SDHAP31040 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SDHAP31040 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SDHAP31040 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SDHAP31040 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAP31040 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAP31040 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAP31040 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAP31040 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SDHAP31040 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.3■□□□□ 0.68
SDHAP31040 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms