Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN6P29350 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN6P29350 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PTPN6P29350 AC096631.2-201ENST00000436136 790 ntBASIC20.52■□□□□ 0.88
PTPN6P29350 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN6P29350 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.52■□□□□ 0.88
PTPN6P29350 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PTPN6P29350 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.52■□□□□ 0.88
PTPN6P29350 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN6P29350 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PTPN6P29350 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN6P29350 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN6P29350 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.51■□□□□ 0.87
PTPN6P29350 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PTPN6P29350 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN6P29350 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN6P29350 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN6P29350 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN6P29350 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN6P29350 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN6P29350 AL139246.5-201ENST00000606645 996 ntBASIC20.51■□□□□ 0.87
PTPN6P29350 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PTPN6P29350 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN6P29350 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPN6P29350 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN6P29350 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN6P29350 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN6P29350 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PTPN6P29350 AC244015.2-201ENST00000616358 1861 ntBASIC20.5■□□□□ 0.87
PTPN6P29350 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN6P29350 AC110285.6-201ENST00000617652 491 ntBASIC20.5■□□□□ 0.87
PTPN6P29350 AL031602.1-201ENST00000633169 911 ntBASIC20.5■□□□□ 0.87
PTPN6P29350 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PTPN6P29350 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN6P29350 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PTPN6P29350 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN6P29350 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PTPN6P29350 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN6P29350 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PTPN6P29350 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN6P29350 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
PTPN6P29350 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN6P29350 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN6P29350 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN6P29350 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN6P29350 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN6P29350 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN6P29350 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PTPN6P29350 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN6P29350 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN6P29350 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN6P29350 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.48■□□□□ 0.87
PTPN6P29350 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN6P29350 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN6P29350 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN6P29350 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN6P29350 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN6P29350 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN6P29350 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN6P29350 AC099791.2-201ENST00000605725 427 ntBASIC20.48■□□□□ 0.87
PTPN6P29350 AC092171.4-201ENST00000609130 632 ntBASIC20.48■□□□□ 0.87
PTPN6P29350 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.48■□□□□ 0.87
PTPN6P29350 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN6P29350 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN6P29350 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.48■□□□□ 0.87
PTPN6P29350 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.48■□□□□ 0.87
PTPN6P29350 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN6P29350 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN6P29350 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.47■□□□□ 0.87
PTPN6P29350 UNC93B3-201ENST00000308076 687 ntBASIC20.47■□□□□ 0.87
PTPN6P29350 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN6P29350 AC241377.3-202ENST00000626088 1088 ntBASIC20.47■□□□□ 0.87
PTPN6P29350 AC241585.3-202ENST00000628937 1088 ntBASIC20.47■□□□□ 0.87
PTPN6P29350 AC245100.8-202ENST00000629247 1058 ntBASIC20.47■□□□□ 0.87
PTPN6P29350 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.47■□□□□ 0.87
PTPN6P29350 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN6P29350 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PTPN6P29350 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.47■□□□□ 0.87
PTPN6P29350 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTPN6P29350 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN6P29350 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PTPN6P29350 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN6P29350 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN6P29350 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN6P29350 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN6P29350 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN6P29350 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN6P29350 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN6P29350 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.46■□□□□ 0.87
PTPN6P29350 DUX4L19-201ENST00000557448 1267 ntBASIC20.46■□□□□ 0.87
PTPN6P29350 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN6P29350 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN6P29350 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN6P29350 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PTPN6P29350 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.45■□□□□ 0.86
PTPN6P29350 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PTPN6P29350 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN6P29350 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN6P29350 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.45■□□□□ 0.86
PTPN6P29350 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms