Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.73■□□□□ 0.91
PTX3P26022 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTX3P26022 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTX3P26022 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTX3P26022 OXCT2P1-201ENST00000447263 1535 ntBASIC20.73■□□□□ 0.91
PTX3P26022 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTX3P26022 PKD1P6-201ENST00000343738 4769 ntBASIC20.72■□□□□ 0.91
PTX3P26022 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTX3P26022 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTX3P26022 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTX3P26022 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.72■□□□□ 0.91
PTX3P26022 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.72■□□□□ 0.91
PTX3P26022 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.72■□□□□ 0.91
PTX3P26022 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTX3P26022 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTX3P26022 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTX3P26022 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTX3P26022 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTX3P26022 OR7E47P-201ENST00000546390 1422 ntBASIC20.71■□□□□ 0.91
PTX3P26022 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PTX3P26022 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTX3P26022 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.71■□□□□ 0.91
PTX3P26022 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTX3P26022 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTX3P26022 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTX3P26022 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTX3P26022 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTX3P26022 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.71■□□□□ 0.91
PTX3P26022 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
PTX3P26022 PBX2P1-201ENST00000493219 1291 ntBASIC20.71■□□□□ 0.91
PTX3P26022 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.71■□□□□ 0.91
PTX3P26022 AC233992.3-201ENST00000607491 485 ntBASIC20.71■□□□□ 0.91
PTX3P26022 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTX3P26022 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTX3P26022 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
PTX3P26022 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PTX3P26022 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTX3P26022 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PTX3P26022 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.7■□□□□ 0.9
PTX3P26022 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
PTX3P26022 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
PTX3P26022 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
PTX3P26022 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.7■□□□□ 0.9
PTX3P26022 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.7■□□□□ 0.9
PTX3P26022 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTX3P26022 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTX3P26022 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTX3P26022 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PTX3P26022 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
PTX3P26022 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.69■□□□□ 0.9
PTX3P26022 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.69■□□□□ 0.9
PTX3P26022 AC106739.1-201ENST00000617035 715 ntBASIC20.69■□□□□ 0.9
PTX3P26022 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.69■□□□□ 0.9
PTX3P26022 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.69■□□□□ 0.9
PTX3P26022 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTX3P26022 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTX3P26022 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTX3P26022 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTX3P26022 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTX3P26022 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTX3P26022 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PTX3P26022 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTX3P26022 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTX3P26022 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.68■□□□□ 0.9
PTX3P26022 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTX3P26022 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PTX3P26022 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.68■□□□□ 0.9
PTX3P26022 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTX3P26022 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PTX3P26022 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTX3P26022 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTX3P26022 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTX3P26022 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PTX3P26022 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.67■□□□□ 0.9
PTX3P26022 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PTX3P26022 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTX3P26022 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTX3P26022 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTX3P26022 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.67■□□□□ 0.9
PTX3P26022 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.67■□□□□ 0.9
PTX3P26022 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTX3P26022 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.67■□□□□ 0.9
PTX3P26022 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PTX3P26022 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTX3P26022 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.67■□□□□ 0.9
PTX3P26022 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTX3P26022 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.66■□□□□ 0.9
PTX3P26022 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTX3P26022 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTX3P26022 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.66■□□□□ 0.9
PTX3P26022 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTX3P26022 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.66■□□□□ 0.9
PTX3P26022 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTX3P26022 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTX3P26022 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.66■□□□□ 0.9
PTX3P26022 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTX3P26022 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTX3P26022 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.66■□□□□ 0.9
PTX3P26022 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTX3P26022 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms