Protein–RNA interactions for Protein: P25441

RPC53, DNA-directed RNA polymerase III subunit RPC4, yeast

Predictions only

Length 422 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	P25441	AIM6	YDL237W	1173 nt		4.04	□□□□□ -1.76
RPC53	P25441	FMP10	YER182W	735 nt		4.04	□□□□□ -1.76
RPC53	P25441	YGL258W-A	YGL258W-A	234 nt		4.04	□□□□□ -1.76
RPC53	P25441	YLR412C-A	YLR412C-A	207 nt		4.04	□□□□□ -1.76
RPC53	P25441	YMR178W	YMR178W	825 nt		4.04	□□□□□ -1.76
RPC53	P25441	OSW1	YOR255W	837 nt		4.04	□□□□□ -1.76
RPC53	P25441	RPS11B	YBR048W	471 nt		4.04	□□□□□ -1.76
RPC53	P25441	YBR096W	YBR096W	693 nt		4.04	□□□□□ -1.76
RPC53	P25441	SMI1	YGR229C	1518 nt		4.04	□□□□□ -1.76
RPC53	P25441	RRN7	YJL025W	1545 nt		4.04	□□□□□ -1.76
RPC53	P25441	PPZ1	YML016C	2079 nt		4.04	□□□□□ -1.76
RPC53	P25441	TRK1	YJL129C	3708 nt		4.04	□□□□□ -1.76
RPC53	P25441	SEC6	YIL068C	2418 nt		4.03	□□□□□ -1.76
RPC53	P25441	GRX3	YDR098C	858 nt		4.03	□□□□□ -1.76
RPC53	P25441	MRPL49	YJL096W	486 nt		4.03	□□□□□ -1.76
RPC53	P25441	IRC9	YJL142C	393 nt		4.03	□□□□□ -1.76
RPC53	P25441	MED11	YMR112C	396 nt		4.03	□□□□□ -1.76
RPC53	P25441	YOL166C	YOL166C	339 nt		4.03	□□□□□ -1.76
RPC53	P25441	YGR117C	YGR117C	1431 nt		4.03	□□□□□ -1.76
RPC53	P25441	ALG1	YBR110W	1350 nt		4.02	□□□□□ -1.77
RPC53	P25441	SPT16	YGL207W	3108 nt		4.02	□□□□□ -1.77
RPC53	P25441	COX2	Q0250	756 nt		4.02	□□□□□ -1.77
RPC53	P25441	PET130	YJL023C	1044 nt		4.02	□□□□□ -1.77
RPC53	P25441	SIL1	YOL031C	1266 nt		4.02	□□□□□ -1.77
RPC53	P25441	IRC14	YOR135C	342 nt		4.02	□□□□□ -1.77
RPC53	P25441	MUM2	YBR057C	1101 nt		4.02	□□□□□ -1.77
RPC53	P25441	ACA1	YER045C	1470 nt		4.02	□□□□□ -1.77
RPC53	P25441	AVT7	YIL088C	1473 nt		4.02	□□□□□ -1.77
RPC53	P25441	PRM15	YMR278W	1869 nt		4.02	□□□□□ -1.77
RPC53	P25441	TSR1	YDL060W	2367 nt		4.02	□□□□□ -1.77
RPC53	P25441	MNL1	YHR204W	2391 nt		4.01	□□□□□ -1.77
RPC53	P25441	WBP1	YEL002C	1293 nt		4.01	□□□□□ -1.77
RPC53	P25441	SOL3	YHR163W	750 nt		4.01	□□□□□ -1.77
RPC53	P25441	CDC45	YLR103C	1953 nt		4.01	□□□□□ -1.77
RPC53	P25441	CAF130	YGR134W	3369 nt		4.01	□□□□□ -1.77
RPC53	P25441	CTM1	YHR109W	1758 nt		4	□□□□□ -1.77
RPC53	P25441	EBP2	YKL172W	1284 nt		4	□□□□□ -1.77
RPC53	P25441	RUF20	RUF20	443 nt		4	□□□□□ -1.77
RPC53	P25441	AAH1	YNL141W	1044 nt		4	□□□□□ -1.77
RPC53	P25441	YBL096C	YBL096C	309 nt		4	□□□□□ -1.77
RPC53	P25441	NTH1	YDR001C	2256 nt		4	□□□□□ -1.77
RPC53	P25441	CEX1	YOR112W	2286 nt		4	□□□□□ -1.77
RPC53	P25441	RDS1	YCR106W	2499 nt		3.99	□□□□□ -1.77
RPC53	P25441	ISM1	YPL040C	3009 nt		3.99	□□□□□ -1.77
RPC53	P25441	SEC59	YMR013C	1560 nt		3.99	□□□□□ -1.77
RPC53	P25441	FAD1	YDL045C	921 nt		3.99	□□□□□ -1.77
RPC53	P25441	RDI1	YDL135C	609 nt		3.99	□□□□□ -1.77
RPC53	P25441	SEC53	YFL045C	765 nt		3.99	□□□□□ -1.77
RPC53	P25441	FOL2	YGR267C	732 nt		3.99	□□□□□ -1.77
RPC53	P25441	CDC8	YJR057W	651 nt		3.99	□□□□□ -1.77
RPC53	P25441	MTD1	YKR080W	963 nt		3.99	□□□□□ -1.77
RPC53	P25441	IES3	YLR052W	753 nt		3.99	□□□□□ -1.77
RPC53	P25441	YOR263C	YOR263C	408 nt		3.99	□□□□□ -1.77
RPC53	P25441	CAF20	YOR276W	486 nt		3.99	□□□□□ -1.77
RPC53	P25441	GPI1	YGR216C	1830 nt		3.99	□□□□□ -1.77
RPC53	P25441	SWI1	YPL016W	3945 nt		3.99	□□□□□ -1.77
RPC53	P25441	ERB1	YMR049C	2424 nt		3.99	□□□□□ -1.77
RPC53	P25441	YOR365C	YOR365C	2112 nt		3.98	□□□□□ -1.77
RPC53	P25441	SLM2	YNL047C	1971 nt		3.98	□□□□□ -1.77
RPC53	P25441	CHD1	YER164W	4407 nt		3.98	□□□□□ -1.77
RPC53	P25441	ZDS1	YMR273C	2748 nt		3.98	□□□□□ -1.77
RPC53	P25441	MRH4	YGL064C	1686 nt		3.98	□□□□□ -1.77
RPC53	P25441	YOL019W	YOL019W	1656 nt		3.98	□□□□□ -1.77
RPC53	P25441	YDR271C	YDR271C	372 nt		3.98	□□□□□ -1.77
RPC53	P25441	FCF1	YDR339C	570 nt		3.98	□□□□□ -1.77
RPC53	P25441	SEM1	YDR363W-A	270 nt		3.98	□□□□□ -1.77
RPC53	P25441	YGL074C	YGL074C	327 nt		3.98	□□□□□ -1.77
RPC53	P25441	IRC25	YLR021W	540 nt		3.98	□□□□□ -1.77
RPC53	P25441	YLR311C	YLR311C	348 nt		3.98	□□□□□ -1.77
RPC53	P25441	YLR444C	YLR444C	303 nt		3.98	□□□□□ -1.77
RPC53	P25441	TIF34	YMR146C	1044 nt		3.98	□□□□□ -1.77
RPC53	P25441	YOR114W	YOR114W	885 nt		3.98	□□□□□ -1.77
RPC53	P25441	SUT2	YPR009W	807 nt		3.98	□□□□□ -1.77
RPC53	P25441	YPR142C	YPR142C	564 nt		3.98	□□□□□ -1.77
RPC53	P25441	YPR003C	YPR003C	2265 nt		3.98	□□□□□ -1.77
RPC53	P25441	GPI10	YGL142C	1851 nt		3.98	□□□□□ -1.77
RPC53	P25441	MEK1	YOR351C	1494 nt		3.98	□□□□□ -1.77
RPC53	P25441	IMD4	YML056C	1575 nt		3.97	□□□□□ -1.77
RPC53	P25441	ORC4	YPR162C	1590 nt		3.97	□□□□□ -1.77
RPC53	P25441	GCN5	YGR252W	1320 nt		3.97	□□□□□ -1.77
RPC53	P25441	APE2	YKL157W	2859 nt		3.97	□□□□□ -1.77
RPC53	P25441	TRX3	YCR083W	384 nt		3.97	□□□□□ -1.77
RPC53	P25441	BSC1	YDL037C	987 nt		3.97	□□□□□ -1.77
RPC53	P25441	PRP11	YDL043C	801 nt		3.97	□□□□□ -1.77
RPC53	P25441	YDR355C	YDR355C	303 nt		3.97	□□□□□ -1.77
RPC53	P25441	YPT35	YHR105W	645 nt		3.97	□□□□□ -1.77
RPC53	P25441	AUR1	YKL004W	1206 nt		3.97	□□□□□ -1.77
RPC53	P25441	TAF6	YGL112C	1551 nt		3.97	□□□□□ -1.77
RPC53	P25441	YAL004W	YAL004W	648 nt		3.96	□□□□□ -1.78
RPC53	P25441	YLR042C	YLR042C	486 nt		3.96	□□□□□ -1.78
RPC53	P25441	PSY3	YLR376C	729 nt		3.96	□□□□□ -1.78
RPC53	P25441	OXR1	YPL196W	822 nt		3.96	□□□□□ -1.78
RPC53	P25441	MRPL51	YPR100W	423 nt		3.96	□□□□□ -1.78
RPC53	P25441	RPS9B	YBR189W	588 nt		3.96	□□□□□ -1.78
RPC53	P25441	MSS4	YDR208W	2340 nt		3.96	□□□□□ -1.78
RPC53	P25441	SPT6	YGR116W	4356 nt		3.96	□□□□□ -1.78
RPC53	P25441	RIT1	YMR283C	1542 nt		3.95	□□□□□ -1.78
RPC53	P25441	RIM4	YHL024W	2142 nt		3.95	□□□□□ -1.78
RPC53	P25441	IOC2	YLR095C	2439 nt		3.95	□□□□□ -1.78
RPC53	P25441	VPS53	YJL029C	2469 nt		3.95	□□□□□ -1.78

Retrieved 100 of 7,029 protein–RNA pairs in 201.9 ms