Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NR4A1P22736 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
NR4A1P22736 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.93■□□□□ 0.78
NR4A1P22736 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.93■□□□□ 0.78
NR4A1P22736 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.93■□□□□ 0.78
NR4A1P22736 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NR4A1P22736 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NR4A1P22736 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
NR4A1P22736 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.92■□□□□ 0.78
NR4A1P22736 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR4A1P22736 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR4A1P22736 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.92■□□□□ 0.78
NR4A1P22736 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR4A1P22736 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
NR4A1P22736 KRT16P3-201ENST00000439127 1283 ntBASIC19.92■□□□□ 0.78
NR4A1P22736 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.92■□□□□ 0.78
NR4A1P22736 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.92■□□□□ 0.78
NR4A1P22736 SNX5-217ENST00000606557 1087 ntBASIC19.92■□□□□ 0.78
NR4A1P22736 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.92■□□□□ 0.78
NR4A1P22736 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NR4A1P22736 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR4A1P22736 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR4A1P22736 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NR4A1P22736 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.92■□□□□ 0.78
NR4A1P22736 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR4A1P22736 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NR4A1P22736 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NR4A1P22736 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.91■□□□□ 0.78
NR4A1P22736 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NR4A1P22736 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NR4A1P22736 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NR4A1P22736 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.91■□□□□ 0.78
NR4A1P22736 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NR4A1P22736 MTDHP2-201ENST00000601468 714 ntBASIC19.91■□□□□ 0.78
NR4A1P22736 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.91■□□□□ 0.78
NR4A1P22736 AC010997.5-201ENST00000609182 354 ntBASIC19.91■□□□□ 0.78
NR4A1P22736 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NR4A1P22736 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.91■□□□□ 0.78
NR4A1P22736 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.91■□□□□ 0.78
NR4A1P22736 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.91■□□□□ 0.78
NR4A1P22736 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NR4A1P22736 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR4A1P22736 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NR4A1P22736 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR4A1P22736 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.9■□□□□ 0.78
NR4A1P22736 AC004448.1-201ENST00000458332 883 ntBASIC19.9■□□□□ 0.78
NR4A1P22736 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NR4A1P22736 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.9■□□□□ 0.78
NR4A1P22736 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.9■□□□□ 0.78
NR4A1P22736 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NR4A1P22736 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NR4A1P22736 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NR4A1P22736 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR4A1P22736 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.9■□□□□ 0.78
NR4A1P22736 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NR4A1P22736 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NR4A1P22736 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NR4A1P22736 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NR4A1P22736 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.89■□□□□ 0.77
NR4A1P22736 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.89■□□□□ 0.77
NR4A1P22736 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.89■□□□□ 0.77
NR4A1P22736 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.89■□□□□ 0.77
NR4A1P22736 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NR4A1P22736 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR4A1P22736 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.88■□□□□ 0.77
NR4A1P22736 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR4A1P22736 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR4A1P22736 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR4A1P22736 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR4A1P22736 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
NR4A1P22736 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NR4A1P22736 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.88■□□□□ 0.77
NR4A1P22736 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR4A1P22736 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR4A1P22736 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR4A1P22736 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NR4A1P22736 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.88■□□□□ 0.77
NR4A1P22736 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NR4A1P22736 AL022069.1-201ENST00000568025 1636 ntBASIC19.87■□□□□ 0.77
NR4A1P22736 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.87■□□□□ 0.77
NR4A1P22736 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NR4A1P22736 AC131274.2-201ENST00000580697 1507 ntBASIC19.87■□□□□ 0.77
NR4A1P22736 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
NR4A1P22736 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NR4A1P22736 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NR4A1P22736 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.87■□□□□ 0.77
NR4A1P22736 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.87■□□□□ 0.77
NR4A1P22736 MIR6722-201ENST00000617286 78 ntBASIC19.87■□□□□ 0.77
NR4A1P22736 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.87■□□□□ 0.77
NR4A1P22736 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.87■□□□□ 0.77
NR4A1P22736 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NR4A1P22736 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NR4A1P22736 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.87■□□□□ 0.77
NR4A1P22736 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NR4A1P22736 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NR4A1P22736 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.86■□□□□ 0.77
NR4A1P22736 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NR4A1P22736 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NR4A1P22736 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
NR4A1P22736 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms