Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN3P20807 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN3P20807 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN3P20807 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN3P20807 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN3P20807 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.76■□□□□ 0.91
CAPN3P20807 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.76■□□□□ 0.91
CAPN3P20807 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN3P20807 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN3P20807 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN3P20807 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN3P20807 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN3P20807 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN3P20807 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN3P20807 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.75■□□□□ 0.91
CAPN3P20807 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN3P20807 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CAPN3P20807 AC096631.2-201ENST00000436136 790 ntBASIC20.75■□□□□ 0.91
CAPN3P20807 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CAPN3P20807 MIR3621-201ENST00000580529 85 ntBASIC20.75■□□□□ 0.91
CAPN3P20807 AL356740.2-201ENST00000601559 647 ntBASIC20.75■□□□□ 0.91
CAPN3P20807 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.75■□□□□ 0.91
CAPN3P20807 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.75■□□□□ 0.91
CAPN3P20807 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN3P20807 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN3P20807 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN3P20807 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN3P20807 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN3P20807 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN3P20807 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN3P20807 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CAPN3P20807 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN3P20807 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN3P20807 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN3P20807 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN3P20807 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CAPN3P20807 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN3P20807 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN3P20807 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.74■□□□□ 0.91
CAPN3P20807 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN3P20807 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN3P20807 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.73■□□□□ 0.91
CAPN3P20807 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN3P20807 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN3P20807 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN3P20807 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.73■□□□□ 0.91
CAPN3P20807 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.73■□□□□ 0.91
CAPN3P20807 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.73■□□□□ 0.91
CAPN3P20807 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN3P20807 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN3P20807 AL117332.1-201ENST00000622628 974 ntBASIC20.73■□□□□ 0.91
CAPN3P20807 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN3P20807 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN3P20807 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN3P20807 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.73■□□□□ 0.91
CAPN3P20807 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN3P20807 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CAPN3P20807 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.72■□□□□ 0.91
CAPN3P20807 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN3P20807 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN3P20807 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CAPN3P20807 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN3P20807 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN3P20807 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN3P20807 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.72■□□□□ 0.91
CAPN3P20807 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN3P20807 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.72■□□□□ 0.91
CAPN3P20807 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.72■□□□□ 0.91
CAPN3P20807 RARRES2P6-201ENST00000567333 442 ntBASIC20.72■□□□□ 0.91
CAPN3P20807 MIR6724-1-201ENST00000616420 92 ntBASIC20.72■□□□□ 0.91
CAPN3P20807 MIR6724-2-201ENST00000616483 92 ntBASIC20.72■□□□□ 0.91
CAPN3P20807 MIR6724-4-201ENST00000617390 92 ntBASIC20.72■□□□□ 0.91
CAPN3P20807 MIR6724-3-201ENST00000622482 92 ntBASIC20.72■□□□□ 0.91
CAPN3P20807 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CAPN3P20807 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN3P20807 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN3P20807 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN3P20807 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN3P20807 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN3P20807 Z98882.1-201ENST00000622160 2253 ntBASIC20.71■□□□□ 0.91
CAPN3P20807 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN3P20807 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN3P20807 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN3P20807 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CAPN3P20807 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN3P20807 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CAPN3P20807 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN3P20807 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN3P20807 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN3P20807 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN3P20807 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CAPN3P20807 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN3P20807 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
CAPN3P20807 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN3P20807 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CAPN3P20807 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CAPN3P20807 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.7■□□□□ 0.9
CAPN3P20807 C17orf82-201ENST00000623772 1530 ntBASIC20.7■□□□□ 0.9
CAPN3P20807 SLC25A24-204ENST00000569674 2357 ntBASIC20.7■□□□□ 0.9
CAPN3P20807 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms