Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
UBL4AP11441 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4AP11441 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4AP11441 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4AP11441 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.93■□□□□ 0.78
UBL4AP11441 PBX2P1-201ENST00000493219 1291 ntBASIC19.93■□□□□ 0.78
UBL4AP11441 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4AP11441 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4AP11441 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4AP11441 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4AP11441 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4AP11441 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBL4AP11441 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
UBL4AP11441 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.92■□□□□ 0.78
UBL4AP11441 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.92■□□□□ 0.78
UBL4AP11441 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.92■□□□□ 0.78
UBL4AP11441 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4AP11441 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4AP11441 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4AP11441 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
UBL4AP11441 AC010141.3-201ENST00000456659 717 ntBASIC19.92■□□□□ 0.78
UBL4AP11441 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4AP11441 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4AP11441 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4AP11441 AC092053.2-201ENST00000640557 1818 ntBASIC19.92■□□□□ 0.78
UBL4AP11441 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.92■□□□□ 0.78
UBL4AP11441 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.92■□□□□ 0.78
UBL4AP11441 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4AP11441 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4AP11441 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBL4AP11441 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
UBL4AP11441 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.91■□□□□ 0.78
UBL4AP11441 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4AP11441 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UBL4AP11441 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4AP11441 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.91■□□□□ 0.78
UBL4AP11441 BX842568.3-201ENST00000418104 571 ntBASIC19.91■□□□□ 0.78
UBL4AP11441 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.91■□□□□ 0.78
UBL4AP11441 AP005435.1-201ENST00000529293 1178 ntBASIC19.91■□□□□ 0.78
UBL4AP11441 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.91■□□□□ 0.78
UBL4AP11441 AC106739.1-201ENST00000617035 715 ntBASIC19.91■□□□□ 0.78
UBL4AP11441 AC110285.6-201ENST00000617652 491 ntBASIC19.91■□□□□ 0.78
UBL4AP11441 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4AP11441 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UBL4AP11441 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.91■□□□□ 0.78
UBL4AP11441 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4AP11441 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.91■□□□□ 0.78
UBL4AP11441 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4AP11441 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBL4AP11441 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.9■□□□□ 0.78
UBL4AP11441 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL4AP11441 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL4AP11441 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL4AP11441 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL4AP11441 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBL4AP11441 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL4AP11441 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL4AP11441 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.9■□□□□ 0.78
UBL4AP11441 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
UBL4AP11441 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
UBL4AP11441 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL4AP11441 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL4AP11441 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL4AP11441 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.9■□□□□ 0.78
UBL4AP11441 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.89■□□□□ 0.78
UBL4AP11441 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBL4AP11441 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
UBL4AP11441 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBL4AP11441 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBL4AP11441 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.89■□□□□ 0.77
UBL4AP11441 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBL4AP11441 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
UBL4AP11441 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.89■□□□□ 0.77
UBL4AP11441 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
UBL4AP11441 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBL4AP11441 AC079089.2-201ENST00000531211 1277 ntBASIC19.89■□□□□ 0.77
UBL4AP11441 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
UBL4AP11441 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.89■□□□□ 0.77
UBL4AP11441 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBL4AP11441 AC233992.3-201ENST00000607491 485 ntBASIC19.89■□□□□ 0.77
UBL4AP11441 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.89■□□□□ 0.77
UBL4AP11441 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
UBL4AP11441 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBL4AP11441 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBL4AP11441 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBL4AP11441 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBL4AP11441 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBL4AP11441 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.88■□□□□ 0.77
UBL4AP11441 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
UBL4AP11441 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBL4AP11441 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.88■□□□□ 0.77
UBL4AP11441 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBL4AP11441 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.88■□□□□ 0.77
UBL4AP11441 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.88■□□□□ 0.77
UBL4AP11441 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBL4AP11441 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
UBL4AP11441 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.88■□□□□ 0.77
UBL4AP11441 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
UBL4AP11441 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.87■□□□□ 0.77
UBL4AP11441 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms