Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RETP07949 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RETP07949 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.84■■□□□ 1.09
RETP07949 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.84■■□□□ 1.09
RETP07949 AL138781.1-201ENST00000566567 1274 ntBASIC21.84■■□□□ 1.09
RETP07949 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.84■■□□□ 1.09
RETP07949 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.84■■□□□ 1.09
RETP07949 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RETP07949 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RETP07949 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RETP07949 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RETP07949 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RETP07949 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RETP07949 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RETP07949 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RETP07949 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RETP07949 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.83■■□□□ 1.09
RETP07949 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RETP07949 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RETP07949 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
RETP07949 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.83■■□□□ 1.09
RETP07949 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.83■■□□□ 1.09
RETP07949 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.83■■□□□ 1.09
RETP07949 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.83■■□□□ 1.09
RETP07949 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.83■■□□□ 1.09
RETP07949 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.83■■□□□ 1.09
RETP07949 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.83■■□□□ 1.09
RETP07949 AC005181.1-201ENST00000604782 1256 ntBASIC21.83■■□□□ 1.09
RETP07949 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RETP07949 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RETP07949 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RETP07949 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RETP07949 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RETP07949 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RETP07949 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RETP07949 AC007322.1-201ENST00000426983 750 ntBASIC21.82■■□□□ 1.08
RETP07949 AC069152.1-201ENST00000438030 544 ntBASIC21.82■■□□□ 1.08
RETP07949 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RETP07949 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RETP07949 AC079140.4-201ENST00000507448 529 ntBASIC21.82■■□□□ 1.08
RETP07949 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.82■■□□□ 1.08
RETP07949 AC008687.6-201ENST00000596318 630 ntBASIC21.82■■□□□ 1.08
RETP07949 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.82■■□□□ 1.08
RETP07949 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.82■■□□□ 1.08
RETP07949 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RETP07949 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RETP07949 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RETP07949 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.81■■□□□ 1.08
RETP07949 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RETP07949 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.81■■□□□ 1.08
RETP07949 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RETP07949 LINC01529-204ENST00000636474 1715 ntBASIC21.81■■□□□ 1.08
RETP07949 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RETP07949 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RETP07949 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RETP07949 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.81■■□□□ 1.08
RETP07949 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.81■■□□□ 1.08
RETP07949 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.81■■□□□ 1.08
RETP07949 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.81■■□□□ 1.08
RETP07949 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.81■■□□□ 1.08
RETP07949 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RETP07949 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RETP07949 AC133041.1-202ENST00000642053 222 ntBASIC21.81■■□□□ 1.08
RETP07949 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RETP07949 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
RETP07949 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RETP07949 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RETP07949 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RETP07949 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.8■■□□□ 1.08
RETP07949 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
RETP07949 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETP07949 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETP07949 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETP07949 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.79■■□□□ 1.08
RETP07949 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETP07949 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETP07949 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RETP07949 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.79■■□□□ 1.08
RETP07949 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.79■■□□□ 1.08
RETP07949 AC073210.2-201ENST00000430369 194 ntBASIC21.79■■□□□ 1.08
RETP07949 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.79■■□□□ 1.08
RETP07949 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETP07949 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RETP07949 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.79■■□□□ 1.08
RETP07949 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RETP07949 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.78■■□□□ 1.08
RETP07949 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETP07949 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RETP07949 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RETP07949 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.78■■□□□ 1.08
RETP07949 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.78■■□□□ 1.08
RETP07949 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RETP07949 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETP07949 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETP07949 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.78■■□□□ 1.08
RETP07949 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.77■■□□□ 1.08
RETP07949 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.77■■□□□ 1.08
RETP07949 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
RETP07949 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
RETP07949 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms