Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN1P07384 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.22■□□□□ 0.99
CAPN1P07384 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN1P07384 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN1P07384 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.22■□□□□ 0.99
CAPN1P07384 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.22■□□□□ 0.99
CAPN1P07384 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN1P07384 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.22■□□□□ 0.99
CAPN1P07384 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN1P07384 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.22■□□□□ 0.99
CAPN1P07384 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN1P07384 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN1P07384 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.22■□□□□ 0.99
CAPN1P07384 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.22■□□□□ 0.99
CAPN1P07384 AC008764.7-201ENST00000593779 1081 ntBASIC21.22■□□□□ 0.99
CAPN1P07384 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN1P07384 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN1P07384 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPN1P07384 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CAPN1P07384 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.22■□□□□ 0.99
CAPN1P07384 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.21■□□□□ 0.99
CAPN1P07384 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN1P07384 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN1P07384 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN1P07384 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN1P07384 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN1P07384 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN1P07384 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN1P07384 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN1P07384 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CAPN1P07384 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN1P07384 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CAPN1P07384 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN1P07384 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN1P07384 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CAPN1P07384 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN1P07384 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.21■□□□□ 0.99
CAPN1P07384 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.21■□□□□ 0.99
CAPN1P07384 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CAPN1P07384 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN1P07384 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CAPN1P07384 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.2■□□□□ 0.98
CAPN1P07384 AC099791.1-201ENST00000416440 715 ntBASIC21.2■□□□□ 0.98
CAPN1P07384 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN1P07384 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN1P07384 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN1P07384 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CAPN1P07384 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN1P07384 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.2■□□□□ 0.98
CAPN1P07384 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CAPN1P07384 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.19■□□□□ 0.98
CAPN1P07384 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.19■□□□□ 0.98
CAPN1P07384 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CAPN1P07384 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.19■□□□□ 0.98
CAPN1P07384 AL499627.2-201ENST00000606283 725 ntBASIC21.19■□□□□ 0.98
CAPN1P07384 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
CAPN1P07384 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CAPN1P07384 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CAPN1P07384 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CAPN1P07384 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CAPN1P07384 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CAPN1P07384 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CAPN1P07384 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN1P07384 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.18■□□□□ 0.98
CAPN1P07384 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.18■□□□□ 0.98
CAPN1P07384 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN1P07384 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.18■□□□□ 0.98
CAPN1P07384 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN1P07384 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN1P07384 pRNA.6-201ENST00000610482 90 ntBASIC21.18■□□□□ 0.98
CAPN1P07384 pRNA.5-201ENST00000612139 90 ntBASIC21.18■□□□□ 0.98
CAPN1P07384 pRNA.11-201ENST00000618423 90 ntBASIC21.18■□□□□ 0.98
CAPN1P07384 pRNA.13-201ENST00000619112 90 ntBASIC21.18■□□□□ 0.98
CAPN1P07384 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN1P07384 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN1P07384 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN1P07384 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN1P07384 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN1P07384 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.17■□□□□ 0.98
CAPN1P07384 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.17■□□□□ 0.98
CAPN1P07384 BX842568.3-201ENST00000418104 571 ntBASIC21.17■□□□□ 0.98
CAPN1P07384 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.17■□□□□ 0.98
CAPN1P07384 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN1P07384 AC233992.3-201ENST00000607491 485 ntBASIC21.17■□□□□ 0.98
CAPN1P07384 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN1P07384 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.17■□□□□ 0.98
CAPN1P07384 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN1P07384 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN1P07384 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN1P07384 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.16■□□□□ 0.98
CAPN1P07384 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN1P07384 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CAPN1P07384 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
CAPN1P07384 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN1P07384 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN1P07384 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
CAPN1P07384 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN1P07384 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN1P07384 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.15■□□□□ 0.98
CAPN1P07384 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms