Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAPDHP04406 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAPDHP04406 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAPDHP04406 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAPDHP04406 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAPDHP04406 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAPDHP04406 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GAPDHP04406 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAPDHP04406 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GAPDHP04406 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.01■□□□□ 0.47
GAPDHP04406 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.01■□□□□ 0.47
GAPDHP04406 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GAPDHP04406 AL512631.2-201ENST00000604634 923 ntBASIC18.01■□□□□ 0.47
GAPDHP04406 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAPDHP04406 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAPDHP04406 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.01■□□□□ 0.47
GAPDHP04406 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAPDHP04406 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
GAPDHP04406 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.01■□□□□ 0.47
GAPDHP04406 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.01■□□□□ 0.47
GAPDHP04406 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAPDHP04406 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
GAPDHP04406 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.01■□□□□ 0.47
GAPDHP04406 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18■□□□□ 0.47
GAPDHP04406 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
GAPDHP04406 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GAPDHP04406 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18■□□□□ 0.47
GAPDHP04406 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GAPDHP04406 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GAPDHP04406 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
GAPDHP04406 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GAPDHP04406 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18■□□□□ 0.47
GAPDHP04406 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18■□□□□ 0.47
GAPDHP04406 RASSF1-AS1-201ENST00000629828 790 ntBASIC18■□□□□ 0.47
GAPDHP04406 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18■□□□□ 0.47
GAPDHP04406 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18■□□□□ 0.47
GAPDHP04406 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GAPDHP04406 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
GAPDHP04406 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
GAPDHP04406 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GAPDHP04406 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GAPDHP04406 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
GAPDHP04406 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GAPDHP04406 AC080038.3-201ENST00000623346 1952 ntBASIC17.99■□□□□ 0.47
GAPDHP04406 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GAPDHP04406 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.99■□□□□ 0.47
GAPDHP04406 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
GAPDHP04406 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.99■□□□□ 0.47
GAPDHP04406 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GAPDHP04406 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
GAPDHP04406 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
GAPDHP04406 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GAPDHP04406 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
GAPDHP04406 FAM99A-202ENST00000538190 1989 ntBASIC17.99■□□□□ 0.47
GAPDHP04406 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.98■□□□□ 0.47
GAPDHP04406 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GAPDHP04406 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GAPDHP04406 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
GAPDHP04406 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GAPDHP04406 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GAPDHP04406 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GAPDHP04406 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GAPDHP04406 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GAPDHP04406 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GAPDHP04406 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GAPDHP04406 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GAPDHP04406 AC099791.2-201ENST00000605725 427 ntBASIC17.98■□□□□ 0.47
GAPDHP04406 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
GAPDHP04406 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
GAPDHP04406 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GAPDHP04406 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GAPDHP04406 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
GAPDHP04406 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.97■□□□□ 0.47
GAPDHP04406 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAPDHP04406 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAPDHP04406 AC131281.2-201ENST00000520478 145 ntBASIC17.97■□□□□ 0.47
GAPDHP04406 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAPDHP04406 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GAPDHP04406 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAPDHP04406 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAPDHP04406 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GAPDHP04406 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAPDHP04406 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAPDHP04406 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
GAPDHP04406 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GAPDHP04406 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
GAPDHP04406 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAPDHP04406 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
GAPDHP04406 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GAPDHP04406 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAPDHP04406 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GAPDHP04406 DUX4L19-201ENST00000557448 1267 ntBASIC17.96■□□□□ 0.47
GAPDHP04406 MIR4466-201ENST00000606121 54 ntBASIC17.96■□□□□ 0.47
GAPDHP04406 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAPDHP04406 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
GAPDHP04406 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.96■□□□□ 0.47
GAPDHP04406 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.96■□□□□ 0.47
GAPDHP04406 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAPDHP04406 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GAPDHP04406 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms