Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MT-ND3P03897 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
MT-ND3P03897 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.93■■□□□ 1.1
MT-ND3P03897 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MT-ND3P03897 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.93■■□□□ 1.1
MT-ND3P03897 AC133561.4-201ENST00000566112 224 ntBASIC21.93■■□□□ 1.1
MT-ND3P03897 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MT-ND3P03897 AC005703.6-201ENST00000623265 1329 ntBASIC21.93■■□□□ 1.1
MT-ND3P03897 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MT-ND3P03897 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MT-ND3P03897 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MT-ND3P03897 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MT-ND3P03897 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MT-ND3P03897 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
MT-ND3P03897 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
MT-ND3P03897 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.92■■□□□ 1.1
MT-ND3P03897 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MT-ND3P03897 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.92■■□□□ 1.1
MT-ND3P03897 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.92■■□□□ 1.1
MT-ND3P03897 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.92■■□□□ 1.1
MT-ND3P03897 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-ND3P03897 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
MT-ND3P03897 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-ND3P03897 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-ND3P03897 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-ND3P03897 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-ND3P03897 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.91■■□□□ 1.1
MT-ND3P03897 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-ND3P03897 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MT-ND3P03897 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.91■■□□□ 1.1
MT-ND3P03897 MIR935-201ENST00000401179 91 ntBASIC21.91■■□□□ 1.1
MT-ND3P03897 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.91■■□□□ 1.1
MT-ND3P03897 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.91■■□□□ 1.1
MT-ND3P03897 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-ND3P03897 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.91■■□□□ 1.1
MT-ND3P03897 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-ND3P03897 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-ND3P03897 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-ND3P03897 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
MT-ND3P03897 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MT-ND3P03897 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MT-ND3P03897 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.9■■□□□ 1.1
MT-ND3P03897 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.9■■□□□ 1.1
MT-ND3P03897 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.9■■□□□ 1.1
MT-ND3P03897 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MT-ND3P03897 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MT-ND3P03897 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.9■■□□□ 1.1
MT-ND3P03897 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MT-ND3P03897 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
MT-ND3P03897 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
MT-ND3P03897 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
MT-ND3P03897 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.89■■□□□ 1.09
MT-ND3P03897 DUX4L4-201ENST00000566884 1269 ntBASIC21.89■■□□□ 1.09
MT-ND3P03897 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
MT-ND3P03897 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
MT-ND3P03897 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MT-ND3P03897 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.89■■□□□ 1.09
MT-ND3P03897 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MT-ND3P03897 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MT-ND3P03897 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND3P03897 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND3P03897 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND3P03897 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
MT-ND3P03897 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND3P03897 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND3P03897 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND3P03897 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.88■■□□□ 1.09
MT-ND3P03897 AC005837.3-201ENST00000612163 286 ntBASIC21.88■■□□□ 1.09
MT-ND3P03897 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.88■■□□□ 1.09
MT-ND3P03897 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.88■■□□□ 1.09
MT-ND3P03897 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND3P03897 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND3P03897 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
MT-ND3P03897 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND3P03897 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND3P03897 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.88■■□□□ 1.09
MT-ND3P03897 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND3P03897 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND3P03897 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.88■■□□□ 1.09
MT-ND3P03897 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MT-ND3P03897 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MT-ND3P03897 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.87■■□□□ 1.09
MT-ND3P03897 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.87■■□□□ 1.09
MT-ND3P03897 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
MT-ND3P03897 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MT-ND3P03897 SRD5A1P1-201ENST00000442297 786 ntBASIC21.87■■□□□ 1.09
MT-ND3P03897 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.87■■□□□ 1.09
MT-ND3P03897 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.87■■□□□ 1.09
MT-ND3P03897 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.87■■□□□ 1.09
MT-ND3P03897 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MT-ND3P03897 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
MT-ND3P03897 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.87■■□□□ 1.09
MT-ND3P03897 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MT-ND3P03897 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.87■■□□□ 1.09
MT-ND3P03897 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
MT-ND3P03897 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MT-ND3P03897 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
MT-ND3P03897 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MT-ND3P03897 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
MT-ND3P03897 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms