Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.74■□□□□ 0.59
NGFP01138 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.74■□□□□ 0.59
NGFP01138 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.73■□□□□ 0.59
NGFP01138 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NGFP01138 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NGFP01138 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NGFP01138 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.73■□□□□ 0.59
NGFP01138 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NGFP01138 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NGFP01138 MIR935-201ENST00000401179 91 ntBASIC18.73■□□□□ 0.59
NGFP01138 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.73■□□□□ 0.59
NGFP01138 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NGFP01138 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.73■□□□□ 0.59
NGFP01138 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
NGFP01138 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.73■□□□□ 0.59
NGFP01138 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.73■□□□□ 0.59
NGFP01138 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NGFP01138 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NGFP01138 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.73■□□□□ 0.59
NGFP01138 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NGFP01138 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NGFP01138 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NGFP01138 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NGFP01138 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NGFP01138 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NGFP01138 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NGFP01138 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NGFP01138 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NGFP01138 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NGFP01138 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.72■□□□□ 0.59
NGFP01138 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
NGFP01138 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.72■□□□□ 0.59
NGFP01138 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.72■□□□□ 0.59
NGFP01138 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.72■□□□□ 0.59
NGFP01138 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.72■□□□□ 0.59
NGFP01138 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.72■□□□□ 0.59
NGFP01138 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NGFP01138 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NGFP01138 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NGFP01138 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.72■□□□□ 0.59
NGFP01138 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NGFP01138 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NGFP01138 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NGFP01138 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NGFP01138 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.71■□□□□ 0.59
NGFP01138 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
NGFP01138 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.71■□□□□ 0.59
NGFP01138 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFP01138 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFP01138 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFP01138 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.71■□□□□ 0.59
NGFP01138 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFP01138 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFP01138 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.71■□□□□ 0.59
NGFP01138 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFP01138 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.71■□□□□ 0.59
NGFP01138 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NGFP01138 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFP01138 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.71■□□□□ 0.59
NGFP01138 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.71■□□□□ 0.59
NGFP01138 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NGFP01138 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.7■□□□□ 0.58
NGFP01138 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NGFP01138 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NGFP01138 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NGFP01138 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NGFP01138 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.7■□□□□ 0.58
NGFP01138 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NGFP01138 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.7■□□□□ 0.58
NGFP01138 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.7■□□□□ 0.58
NGFP01138 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NGFP01138 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NGFP01138 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NGFP01138 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
NGFP01138 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NGFP01138 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NGFP01138 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NGFP01138 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.69■□□□□ 0.58
NGFP01138 OR7E47P-201ENST00000546390 1422 ntBASIC18.69■□□□□ 0.58
NGFP01138 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NGFP01138 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NGFP01138 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.69■□□□□ 0.58
NGFP01138 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NGFP01138 AC105265.2-201ENST00000467189 838 ntBASIC18.69■□□□□ 0.58
NGFP01138 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.69■□□□□ 0.58
NGFP01138 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NGFP01138 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.69■□□□□ 0.58
NGFP01138 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NGFP01138 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NGFP01138 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NGFP01138 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NGFP01138 AC092053.2-201ENST00000640557 1818 ntBASIC18.69■□□□□ 0.58
NGFP01138 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.69■□□□□ 0.58
NGFP01138 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NGFP01138 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NGFP01138 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NGFP01138 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.68■□□□□ 0.58
NGFP01138 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NGFP01138 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NGFP01138 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms