Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC25■■□□□ 1.59
ALDH1A1P00352 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25■■□□□ 1.59
ALDH1A1P00352 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC25■■□□□ 1.59
ALDH1A1P00352 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC25■■□□□ 1.59
ALDH1A1P00352 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ALDH1A1P00352 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ALDH1A1P00352 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25■■□□□ 1.59
ALDH1A1P00352 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ALDH1A1P00352 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.99■■□□□ 1.59
ALDH1A1P00352 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.99■■□□□ 1.59
ALDH1A1P00352 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.99■■□□□ 1.59
ALDH1A1P00352 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.99■■□□□ 1.59
ALDH1A1P00352 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC24.99■■□□□ 1.59
ALDH1A1P00352 AC006058.3-201ENST00000606217 1069 ntBASIC24.99■■□□□ 1.59
ALDH1A1P00352 AC083880.1-201ENST00000608266 535 ntBASIC24.99■■□□□ 1.59
ALDH1A1P00352 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.99■■□□□ 1.59
ALDH1A1P00352 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.98■■□□□ 1.59
ALDH1A1P00352 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
ALDH1A1P00352 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ALDH1A1P00352 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC24.98■■□□□ 1.59
ALDH1A1P00352 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ALDH1A1P00352 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.98■■□□□ 1.59
ALDH1A1P00352 MYC-209ENST00000641252 345 ntBASIC24.98■■□□□ 1.59
ALDH1A1P00352 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
ALDH1A1P00352 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
ALDH1A1P00352 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ALDH1A1P00352 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
ALDH1A1P00352 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
ALDH1A1P00352 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ALDH1A1P00352 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC24.97■■□□□ 1.59
ALDH1A1P00352 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC24.97■■□□□ 1.59
ALDH1A1P00352 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.97■■□□□ 1.59
ALDH1A1P00352 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ALDH1A1P00352 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ALDH1A1P00352 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ALDH1A1P00352 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
ALDH1A1P00352 GAS7-202ENST00000396115 929 ntTSL 5 BASIC24.96■■□□□ 1.59
ALDH1A1P00352 BX276092.2-201ENST00000417668 665 ntBASIC24.96■■□□□ 1.59
ALDH1A1P00352 AC128676.1-201ENST00000454392 318 ntBASIC24.96■■□□□ 1.59
ALDH1A1P00352 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.96■■□□□ 1.59
ALDH1A1P00352 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC24.96■■□□□ 1.59
ALDH1A1P00352 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
ALDH1A1P00352 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC24.96■■□□□ 1.59
ALDH1A1P00352 MMAB-206ENST00000540016 945 ntTSL 3 BASIC24.96■■□□□ 1.59
ALDH1A1P00352 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.96■■□□□ 1.59
ALDH1A1P00352 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.96■■□□□ 1.59
ALDH1A1P00352 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
ALDH1A1P00352 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
ALDH1A1P00352 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ALDH1A1P00352 AL353803.4-201ENST00000565882 1934 ntBASIC24.95■■□□□ 1.58
ALDH1A1P00352 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
ALDH1A1P00352 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
ALDH1A1P00352 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC24.95■■□□□ 1.58
ALDH1A1P00352 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC24.95■■□□□ 1.58
ALDH1A1P00352 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC24.95■■□□□ 1.58
ALDH1A1P00352 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
ALDH1A1P00352 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.95■■□□□ 1.58
ALDH1A1P00352 MMD2-204ENST00000612910 778 ntTSL 5 BASIC24.95■■□□□ 1.58
ALDH1A1P00352 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
ALDH1A1P00352 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ALDH1A1P00352 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ALDH1A1P00352 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
ALDH1A1P00352 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ALDH1A1P00352 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ALDH1A1P00352 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.94■■□□□ 1.58
ALDH1A1P00352 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
ALDH1A1P00352 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
ALDH1A1P00352 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC24.94■■□□□ 1.58
ALDH1A1P00352 AC093787.1-201ENST00000450396 207 ntBASIC24.94■■□□□ 1.58
ALDH1A1P00352 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ALDH1A1P00352 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
ALDH1A1P00352 AC022211.4-201ENST00000625094 2161 ntBASIC24.94■■□□□ 1.58
ALDH1A1P00352 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ALDH1A1P00352 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.94■■□□□ 1.58
ALDH1A1P00352 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ALDH1A1P00352 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ALDH1A1P00352 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
ALDH1A1P00352 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ALDH1A1P00352 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
ALDH1A1P00352 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
ALDH1A1P00352 UNC93B4-201ENST00000505679 747 ntBASIC24.93■■□□□ 1.58
ALDH1A1P00352 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.93■■□□□ 1.58
ALDH1A1P00352 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC24.93■■□□□ 1.58
ALDH1A1P00352 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.93■■□□□ 1.58
ALDH1A1P00352 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
ALDH1A1P00352 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
ALDH1A1P00352 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ALDH1A1P00352 AC016405.3-201ENST00000607710 860 ntBASIC24.92■■□□□ 1.58
ALDH1A1P00352 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
ALDH1A1P00352 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ALDH1A1P00352 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
ALDH1A1P00352 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC24.91■■□□□ 1.58
ALDH1A1P00352 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.91■■□□□ 1.58
ALDH1A1P00352 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
ALDH1A1P00352 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ALDH1A1P00352 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ALDH1A1P00352 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC24.91■■□□□ 1.58
ALDH1A1P00352 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ALDH1A1P00352 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
ALDH1A1P00352 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms