Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 GUSBP6-202ENST00000438529 1198 ntBASIC18.07■□□□□ 0.48
ABCA1O95477 CNN2P6-201ENST00000439038 900 ntBASIC18.07■□□□□ 0.48
ABCA1O95477 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ABCA1O95477 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ABCA1O95477 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ABCA1O95477 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ABCA1O95477 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ABCA1O95477 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ABCA1O95477 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.07■□□□□ 0.48
ABCA1O95477 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ABCA1O95477 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.07■□□□□ 0.48
ABCA1O95477 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ABCA1O95477 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ABCA1O95477 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ABCA1O95477 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ABCA1O95477 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.06■□□□□ 0.48
ABCA1O95477 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.06■□□□□ 0.48
ABCA1O95477 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ABCA1O95477 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ABCA1O95477 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.06■□□□□ 0.48
ABCA1O95477 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ABCA1O95477 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.06■□□□□ 0.48
ABCA1O95477 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ABCA1O95477 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.06■□□□□ 0.48
ABCA1O95477 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ABCA1O95477 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.06■□□□□ 0.48
ABCA1O95477 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.06■□□□□ 0.48
ABCA1O95477 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ABCA1O95477 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.05■□□□□ 0.48
ABCA1O95477 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.05■□□□□ 0.48
ABCA1O95477 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.05■□□□□ 0.48
ABCA1O95477 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.05■□□□□ 0.48
ABCA1O95477 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
ABCA1O95477 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ABCA1O95477 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.05■□□□□ 0.48
ABCA1O95477 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ABCA1O95477 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ABCA1O95477 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ABCA1O95477 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.05■□□□□ 0.48
ABCA1O95477 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ABCA1O95477 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ABCA1O95477 AC133561.1-201ENST00000568600 2415 ntBASIC18.05■□□□□ 0.48
ABCA1O95477 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ABCA1O95477 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.04■□□□□ 0.48
ABCA1O95477 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ABCA1O95477 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ABCA1O95477 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ABCA1O95477 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ABCA1O95477 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.04■□□□□ 0.48
ABCA1O95477 SLC7A5P2-201ENST00000553010 536 ntBASIC18.04■□□□□ 0.48
ABCA1O95477 KRT18P6-201ENST00000555540 1265 ntBASIC18.04■□□□□ 0.48
ABCA1O95477 SMUG1P1-201ENST00000590640 811 ntBASIC18.04■□□□□ 0.48
ABCA1O95477 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ABCA1O95477 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ABCA1O95477 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ABCA1O95477 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ABCA1O95477 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.04■□□□□ 0.48
ABCA1O95477 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA1O95477 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA1O95477 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA1O95477 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA1O95477 AC069152.1-201ENST00000438030 544 ntBASIC18.03■□□□□ 0.48
ABCA1O95477 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA1O95477 AC083906.2-201ENST00000511578 360 ntBASIC18.03■□□□□ 0.48
ABCA1O95477 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.03■□□□□ 0.48
ABCA1O95477 AC008687.6-201ENST00000596318 630 ntBASIC18.03■□□□□ 0.48
ABCA1O95477 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA1O95477 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA1O95477 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ABCA1O95477 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA1O95477 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.03■□□□□ 0.48
ABCA1O95477 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA1O95477 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.03■□□□□ 0.48
ABCA1O95477 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA1O95477 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA1O95477 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA1O95477 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ABCA1O95477 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA1O95477 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA1O95477 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.03■□□□□ 0.48
ABCA1O95477 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA1O95477 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ABCA1O95477 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ABCA1O95477 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ABCA1O95477 SLC29A4P1-201ENST00000398760 971 ntBASIC18.02■□□□□ 0.48
ABCA1O95477 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.02■□□□□ 0.48
ABCA1O95477 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.02■□□□□ 0.48
ABCA1O95477 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ABCA1O95477 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ABCA1O95477 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.02■□□□□ 0.48
ABCA1O95477 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ABCA1O95477 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ABCA1O95477 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ABCA1O95477 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ABCA1O95477 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.02■□□□□ 0.48
ABCA1O95477 AC079630.1-202ENST00000618127 1840 ntBASIC18.02■□□□□ 0.48
ABCA1O95477 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
ABCA1O95477 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ABCA1O95477 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
ABCA1O95477 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms