Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
SOX30O94993 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SOX30O94993 SLC47A1P1-202ENST00000449666 945 ntBASIC20.08■□□□□ 0.81
SOX30O94993 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SOX30O94993 AC010525.1-201ENST00000585559 441 ntBASIC20.08■□□□□ 0.81
SOX30O94993 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
SOX30O94993 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SOX30O94993 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.08■□□□□ 0.8
SOX30O94993 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SOX30O94993 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SOX30O94993 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SOX30O94993 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SOX30O94993 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SOX30O94993 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SOX30O94993 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX30O94993 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SOX30O94993 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX30O94993 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX30O94993 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SOX30O94993 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX30O94993 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.07■□□□□ 0.8
SOX30O94993 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX30O94993 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SOX30O94993 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SOX30O94993 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SOX30O94993 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SOX30O94993 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SOX30O94993 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX30O94993 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX30O94993 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX30O94993 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX30O94993 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX30O94993 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SOX30O94993 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX30O94993 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX30O94993 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.06■□□□□ 0.8
SOX30O94993 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.06■□□□□ 0.8
SOX30O94993 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.06■□□□□ 0.8
SOX30O94993 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SOX30O94993 MIR4767-201ENST00000582827 78 ntBASIC20.06■□□□□ 0.8
SOX30O94993 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX30O94993 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX30O94993 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX30O94993 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX30O94993 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SOX30O94993 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SOX30O94993 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SOX30O94993 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SOX30O94993 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SOX30O94993 EDA-201ENST00000338901 1233 ntBASIC20.05■□□□□ 0.8
SOX30O94993 AC024257.2-201ENST00000549699 147 ntBASIC20.05■□□□□ 0.8
SOX30O94993 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.05■□□□□ 0.8
SOX30O94993 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.05■□□□□ 0.8
SOX30O94993 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SOX30O94993 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.05■□□□□ 0.8
SOX30O94993 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SOX30O94993 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SOX30O94993 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SOX30O94993 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SOX30O94993 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SOX30O94993 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SOX30O94993 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SOX30O94993 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SOX30O94993 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SOX30O94993 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SOX30O94993 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.04■□□□□ 0.8
SOX30O94993 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.04■□□□□ 0.8
SOX30O94993 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.04■□□□□ 0.8
SOX30O94993 AC106739.1-201ENST00000617035 715 ntBASIC20.04■□□□□ 0.8
SOX30O94993 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.04■□□□□ 0.8
SOX30O94993 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
SOX30O94993 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SOX30O94993 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.03■□□□□ 0.8
SOX30O94993 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.03■□□□□ 0.8
SOX30O94993 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SOX30O94993 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SOX30O94993 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SOX30O94993 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SOX30O94993 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SOX30O94993 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.03■□□□□ 0.8
SOX30O94993 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.03■□□□□ 0.8
SOX30O94993 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
SOX30O94993 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.03■□□□□ 0.8
SOX30O94993 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.03■□□□□ 0.8
SOX30O94993 AC133561.4-201ENST00000566112 224 ntBASIC20.03■□□□□ 0.8
SOX30O94993 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SOX30O94993 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SOX30O94993 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SOX30O94993 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.03■□□□□ 0.8
SOX30O94993 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SOX30O94993 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.03■□□□□ 0.8
SOX30O94993 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.03■□□□□ 0.8
SOX30O94993 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SOX30O94993 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SOX30O94993 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SOX30O94993 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SOX30O94993 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SOX30O94993 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.02■□□□□ 0.8
SOX30O94993 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SOX30O94993 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms