Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.69■■□□□ 1.06
RFPL1O75677 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
RFPL1O75677 PBX2P1-201ENST00000493219 1291 ntBASIC21.69■■□□□ 1.06
RFPL1O75677 AC106739.1-201ENST00000617035 715 ntBASIC21.69■■□□□ 1.06
RFPL1O75677 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFPL1O75677 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFPL1O75677 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RFPL1O75677 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFPL1O75677 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFPL1O75677 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFPL1O75677 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFPL1O75677 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RFPL1O75677 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.68■■□□□ 1.06
RFPL1O75677 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFPL1O75677 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFPL1O75677 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RFPL1O75677 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFPL1O75677 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFPL1O75677 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RFPL1O75677 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.67■■□□□ 1.06
RFPL1O75677 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.67■■□□□ 1.06
RFPL1O75677 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFPL1O75677 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.67■■□□□ 1.06
RFPL1O75677 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFPL1O75677 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.67■■□□□ 1.06
RFPL1O75677 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFPL1O75677 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.67■■□□□ 1.06
RFPL1O75677 AC142381.2-201ENST00000566120 298 ntBASIC21.67■■□□□ 1.06
RFPL1O75677 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RFPL1O75677 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.67■■□□□ 1.06
RFPL1O75677 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFPL1O75677 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFPL1O75677 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFPL1O75677 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.66■■□□□ 1.06
RFPL1O75677 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.66■■□□□ 1.06
RFPL1O75677 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFPL1O75677 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RFPL1O75677 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.66■■□□□ 1.06
RFPL1O75677 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFPL1O75677 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFPL1O75677 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFPL1O75677 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.66■■□□□ 1.06
RFPL1O75677 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.66■■□□□ 1.06
RFPL1O75677 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFPL1O75677 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFPL1O75677 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.66■■□□□ 1.06
RFPL1O75677 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
RFPL1O75677 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFPL1O75677 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFPL1O75677 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFPL1O75677 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
RFPL1O75677 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
RFPL1O75677 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFPL1O75677 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.65■■□□□ 1.06
RFPL1O75677 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFPL1O75677 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFPL1O75677 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFPL1O75677 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.65■■□□□ 1.06
RFPL1O75677 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RFPL1O75677 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFPL1O75677 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RFPL1O75677 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RFPL1O75677 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFPL1O75677 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RFPL1O75677 AL499627.2-201ENST00000606283 725 ntBASIC21.64■■□□□ 1.05
RFPL1O75677 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.64■■□□□ 1.05
RFPL1O75677 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFPL1O75677 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFPL1O75677 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFPL1O75677 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RFPL1O75677 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFPL1O75677 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.63■■□□□ 1.05
RFPL1O75677 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.63■■□□□ 1.05
RFPL1O75677 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.63■■□□□ 1.05
RFPL1O75677 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFPL1O75677 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.63■■□□□ 1.05
RFPL1O75677 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.63■■□□□ 1.05
RFPL1O75677 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFPL1O75677 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.63■■□□□ 1.05
RFPL1O75677 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.63■■□□□ 1.05
RFPL1O75677 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFPL1O75677 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFPL1O75677 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFPL1O75677 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RFPL1O75677 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFPL1O75677 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFPL1O75677 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.62■■□□□ 1.05
RFPL1O75677 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.62■■□□□ 1.05
RFPL1O75677 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.62■■□□□ 1.05
RFPL1O75677 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RFPL1O75677 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFPL1O75677 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFPL1O75677 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFPL1O75677 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFPL1O75677 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.61■■□□□ 1.05
RFPL1O75677 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
RFPL1O75677 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFPL1O75677 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFPL1O75677 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFPL1O75677 UNC93B3-201ENST00000308076 687 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 280.2 ms