Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.37■■□□□ 1.01
GFRA3O60609 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GFRA3O60609 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
GFRA3O60609 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
GFRA3O60609 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GFRA3O60609 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GFRA3O60609 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
GFRA3O60609 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GFRA3O60609 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
GFRA3O60609 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GFRA3O60609 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.36■■□□□ 1.01
GFRA3O60609 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GFRA3O60609 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
GFRA3O60609 AC009237.3-201ENST00000393279 1427 ntBASIC21.36■■□□□ 1.01
GFRA3O60609 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
GFRA3O60609 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.35■■□□□ 1.01
GFRA3O60609 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
GFRA3O60609 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GFRA3O60609 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GFRA3O60609 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GFRA3O60609 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.35■■□□□ 1.01
GFRA3O60609 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.35■■□□□ 1.01
GFRA3O60609 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.35■■□□□ 1.01
GFRA3O60609 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.35■■□□□ 1.01
GFRA3O60609 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.35■■□□□ 1.01
GFRA3O60609 AC010141.2-201ENST00000452426 721 ntBASIC21.35■■□□□ 1.01
GFRA3O60609 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.35■■□□□ 1.01
GFRA3O60609 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.35■■□□□ 1.01
GFRA3O60609 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
GFRA3O60609 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GFRA3O60609 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.35■■□□□ 1.01
GFRA3O60609 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
GFRA3O60609 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.35■■□□□ 1.01
GFRA3O60609 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GFRA3O60609 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
GFRA3O60609 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.35■■□□□ 1.01
GFRA3O60609 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GFRA3O60609 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.34■■□□□ 1.01
GFRA3O60609 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.34■■□□□ 1.01
GFRA3O60609 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
GFRA3O60609 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
GFRA3O60609 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.34■■□□□ 1.01
GFRA3O60609 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GFRA3O60609 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GFRA3O60609 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
GFRA3O60609 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GFRA3O60609 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GFRA3O60609 TMPOP1-202ENST00000424642 1267 ntBASIC21.34■■□□□ 1.01
GFRA3O60609 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GFRA3O60609 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GFRA3O60609 PRKY-204ENST00000533551 1019 ntBASIC21.34■■□□□ 1.01
GFRA3O60609 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
GFRA3O60609 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.34■■□□□ 1.01
GFRA3O60609 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GFRA3O60609 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GFRA3O60609 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.34■■□□□ 1.01
GFRA3O60609 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.34■■□□□ 1.01
GFRA3O60609 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
GFRA3O60609 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
GFRA3O60609 KRT17P2-201ENST00000300992 1314 ntBASIC21.33■■□□□ 1.01
GFRA3O60609 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
GFRA3O60609 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
GFRA3O60609 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
GFRA3O60609 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
GFRA3O60609 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
GFRA3O60609 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
GFRA3O60609 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.33■■□□□ 1.01
GFRA3O60609 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.33■■□□□ 1.01
GFRA3O60609 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.33■■□□□ 1.01
GFRA3O60609 AC010501.1-201ENST00000606270 1962 ntBASIC21.33■■□□□ 1.01
GFRA3O60609 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
GFRA3O60609 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.32■■□□□ 1
GFRA3O60609 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.32■■□□□ 1
GFRA3O60609 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.32■■□□□ 1
GFRA3O60609 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GFRA3O60609 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GFRA3O60609 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.32■■□□□ 1
GFRA3O60609 AC087499.1-201ENST00000418141 1075 ntBASIC21.32■■□□□ 1
GFRA3O60609 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.32■■□□□ 1
GFRA3O60609 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.32■■□□□ 1
GFRA3O60609 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.32■■□□□ 1
GFRA3O60609 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.32■■□□□ 1
GFRA3O60609 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.32■■□□□ 1
GFRA3O60609 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.32■■□□□ 1
GFRA3O60609 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GFRA3O60609 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.31■■□□□ 1
GFRA3O60609 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.31■■□□□ 1
GFRA3O60609 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.31■■□□□ 1
GFRA3O60609 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GFRA3O60609 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.31■■□□□ 1
GFRA3O60609 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.31■■□□□ 1
GFRA3O60609 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GFRA3O60609 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
GFRA3O60609 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.31■■□□□ 1
GFRA3O60609 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
GFRA3O60609 SLC6A10P-202ENST00000431994 2058 ntBASIC21.3■■□□□ 1
GFRA3O60609 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.3■■□□□ 1
GFRA3O60609 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.3■■□□□ 1
GFRA3O60609 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.3■■□□□ 1
GFRA3O60609 AC144652.1-201ENST00000609974 1624 ntBASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms