Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
FOXN1O15353 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.88■■□□□ 1.73
FOXN1O15353 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
FOXN1O15353 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
FOXN1O15353 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
FOXN1O15353 AF201337.1-201ENST00000520239 748 ntBASIC25.88■■□□□ 1.73
FOXN1O15353 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC25.88■■□□□ 1.73
FOXN1O15353 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
FOXN1O15353 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
FOXN1O15353 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
FOXN1O15353 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
FOXN1O15353 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC25.87■■□□□ 1.73
FOXN1O15353 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
FOXN1O15353 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.87■■□□□ 1.73
FOXN1O15353 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.87■■□□□ 1.73
FOXN1O15353 AC142381.4-202ENST00000563973 229 ntBASIC25.87■■□□□ 1.73
FOXN1O15353 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
FOXN1O15353 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
FOXN1O15353 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
FOXN1O15353 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
FOXN1O15353 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
FOXN1O15353 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
FOXN1O15353 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
FOXN1O15353 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
FOXN1O15353 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
FOXN1O15353 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
FOXN1O15353 C9orf163-202ENST00000624034 2573 ntBASIC25.86■■□□□ 1.73
FOXN1O15353 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.86■■□□□ 1.73
FOXN1O15353 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
FOXN1O15353 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
FOXN1O15353 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.86■■□□□ 1.73
FOXN1O15353 AC092118.2-201ENST00000613495 667 ntBASIC25.86■■□□□ 1.73
FOXN1O15353 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25.86■■□□□ 1.73
FOXN1O15353 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
FOXN1O15353 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
FOXN1O15353 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
FOXN1O15353 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
FOXN1O15353 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
FOXN1O15353 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
FOXN1O15353 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
FOXN1O15353 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.85■■□□□ 1.73
FOXN1O15353 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
FOXN1O15353 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
FOXN1O15353 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
FOXN1O15353 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
FOXN1O15353 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
FOXN1O15353 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
FOXN1O15353 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
FOXN1O15353 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.85■■□□□ 1.73
FOXN1O15353 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
FOXN1O15353 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.85■■□□□ 1.73
FOXN1O15353 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
FOXN1O15353 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
FOXN1O15353 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.85■■□□□ 1.73
FOXN1O15353 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
FOXN1O15353 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
FOXN1O15353 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
FOXN1O15353 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
FOXN1O15353 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
FOXN1O15353 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC25.84■■□□□ 1.73
FOXN1O15353 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.84■■□□□ 1.73
FOXN1O15353 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC25.84■■□□□ 1.73
FOXN1O15353 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.84■■□□□ 1.73
FOXN1O15353 AC105036.2-201ENST00000569468 176 ntBASIC25.84■■□□□ 1.73
FOXN1O15353 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
FOXN1O15353 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
FOXN1O15353 DUSP8P5-201ENST00000422884 1815 ntBASIC25.84■■□□□ 1.73
FOXN1O15353 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.83■■□□□ 1.73
FOXN1O15353 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC25.83■■□□□ 1.73
FOXN1O15353 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
FOXN1O15353 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
FOXN1O15353 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
FOXN1O15353 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.83■■□□□ 1.73
FOXN1O15353 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.83■■□□□ 1.73
FOXN1O15353 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC25.83■■□□□ 1.73
FOXN1O15353 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
FOXN1O15353 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
FOXN1O15353 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
FOXN1O15353 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.83■■□□□ 1.73
FOXN1O15353 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.72
FOXN1O15353 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
FOXN1O15353 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
FOXN1O15353 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
FOXN1O15353 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
FOXN1O15353 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC25.82■■□□□ 1.72
FOXN1O15353 RARRES2P4-201ENST00000514074 484 ntBASIC25.82■■□□□ 1.72
FOXN1O15353 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
FOXN1O15353 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
FOXN1O15353 AC068473.5-201ENST00000616428 2072 ntBASIC25.82■■□□□ 1.72
FOXN1O15353 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
FOXN1O15353 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC25.82■■□□□ 1.72
FOXN1O15353 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
FOXN1O15353 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
FOXN1O15353 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.81■■□□□ 1.72
FOXN1O15353 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
FOXN1O15353 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
FOXN1O15353 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.81■■□□□ 1.72
FOXN1O15353 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.81■■□□□ 1.72
FOXN1O15353 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
FOXN1O15353 AL022069.1-201ENST00000568025 1636 ntBASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms