Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TAF4O00268 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TAF4O00268 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.05■□□□□ 0.96
TAF4O00268 KRT19P1-201ENST00000405746 1186 ntBASIC21.05■□□□□ 0.96
TAF4O00268 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TAF4O00268 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TAF4O00268 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TAF4O00268 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TAF4O00268 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.04■□□□□ 0.96
TAF4O00268 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TAF4O00268 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.04■□□□□ 0.96
TAF4O00268 SLC7A5P2-201ENST00000553010 536 ntBASIC21.04■□□□□ 0.96
TAF4O00268 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.04■□□□□ 0.96
TAF4O00268 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TAF4O00268 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TAF4O00268 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TAF4O00268 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TAF4O00268 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TAF4O00268 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TAF4O00268 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.03■□□□□ 0.96
TAF4O00268 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TAF4O00268 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TAF4O00268 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
TAF4O00268 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.03■□□□□ 0.96
TAF4O00268 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
TAF4O00268 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TAF4O00268 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.03■□□□□ 0.96
TAF4O00268 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TAF4O00268 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TAF4O00268 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TAF4O00268 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
TAF4O00268 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.03■□□□□ 0.96
TAF4O00268 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TAF4O00268 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TAF4O00268 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
TAF4O00268 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TAF4O00268 KRT18P11-201ENST00000435214 1283 ntBASIC21.02■□□□□ 0.96
TAF4O00268 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
TAF4O00268 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TAF4O00268 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TAF4O00268 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TAF4O00268 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TAF4O00268 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TAF4O00268 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TAF4O00268 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TAF4O00268 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TAF4O00268 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TAF4O00268 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TAF4O00268 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.01■□□□□ 0.95
TAF4O00268 OR2I1P-207ENST00000453522 948 ntBASIC21.01■□□□□ 0.95
TAF4O00268 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.01■□□□□ 0.95
TAF4O00268 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.01■□□□□ 0.95
TAF4O00268 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.01■□□□□ 0.95
TAF4O00268 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.01■□□□□ 0.95
TAF4O00268 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TAF4O00268 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TAF4O00268 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TAF4O00268 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.01■□□□□ 0.95
TAF4O00268 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TAF4O00268 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
TAF4O00268 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21■□□□□ 0.95
TAF4O00268 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TAF4O00268 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TAF4O00268 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TAF4O00268 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21■□□□□ 0.95
TAF4O00268 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21■□□□□ 0.95
TAF4O00268 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TAF4O00268 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21■□□□□ 0.95
TAF4O00268 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21■□□□□ 0.95
TAF4O00268 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21■□□□□ 0.95
TAF4O00268 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
TAF4O00268 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TAF4O00268 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TAF4O00268 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TAF4O00268 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TAF4O00268 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TAF4O00268 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TAF4O00268 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TAF4O00268 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TAF4O00268 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TAF4O00268 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.99■□□□□ 0.95
TAF4O00268 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TAF4O00268 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.99■□□□□ 0.95
TAF4O00268 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TAF4O00268 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TAF4O00268 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TAF4O00268 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TAF4O00268 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.98■□□□□ 0.95
TAF4O00268 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TAF4O00268 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TAF4O00268 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TAF4O00268 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TAF4O00268 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TAF4O00268 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TAF4O00268 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TAF4O00268 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.98■□□□□ 0.95
TAF4O00268 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.98■□□□□ 0.95
TAF4O00268 ITM2C-210ENST00000620962 501 ntBASIC20.98■□□□□ 0.95
TAF4O00268 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TAF4O00268 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms