Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA2E9PIF3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA2E9PIF3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA2E9PIF3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA2E9PIF3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA2E9PIF3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA2E9PIF3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NPIPA2E9PIF3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.68■□□□□ 0.74
NPIPA2E9PIF3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.68■□□□□ 0.74
NPIPA2E9PIF3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA2E9PIF3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NPIPA2E9PIF3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA2E9PIF3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.68■□□□□ 0.74
NPIPA2E9PIF3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 AC092437.1-201ENST00000624794 1048 ntBASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPA2E9PIF3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NPIPA2E9PIF3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.66■□□□□ 0.74
NPIPA2E9PIF3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA2E9PIF3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA2E9PIF3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA2E9PIF3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.66■□□□□ 0.74
NPIPA2E9PIF3 AC004911.1-201ENST00000416316 871 ntBASIC19.66■□□□□ 0.74
NPIPA2E9PIF3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.66■□□□□ 0.74
NPIPA2E9PIF3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.66■□□□□ 0.74
NPIPA2E9PIF3 RARRES2P11-201ENST00000635158 484 ntBASIC19.66■□□□□ 0.74
NPIPA2E9PIF3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA2E9PIF3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA2E9PIF3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA2E9PIF3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.66■□□□□ 0.74
NPIPA2E9PIF3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NPIPA2E9PIF3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPA2E9PIF3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NPIPA2E9PIF3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPA2E9PIF3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPA2E9PIF3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.65■□□□□ 0.74
NPIPA2E9PIF3 AC090192.1-201ENST00000517740 490 ntBASIC19.65■□□□□ 0.74
NPIPA2E9PIF3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPA2E9PIF3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
NPIPA2E9PIF3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPA2E9PIF3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPA2E9PIF3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPA2E9PIF3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPA2E9PIF3 AC068473.5-201ENST00000616428 2072 ntBASIC19.64■□□□□ 0.74
NPIPA2E9PIF3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NPIPA2E9PIF3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.64■□□□□ 0.74
NPIPA2E9PIF3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPA2E9PIF3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPA2E9PIF3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPA2E9PIF3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPA2E9PIF3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPA2E9PIF3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NPIPA2E9PIF3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NPIPA2E9PIF3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.64■□□□□ 0.73
NPIPA2E9PIF3 BX005040.4-201ENST00000637145 1518 ntBASIC19.64■□□□□ 0.73
NPIPA2E9PIF3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.64■□□□□ 0.73
NPIPA2E9PIF3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPA2E9PIF3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NPIPA2E9PIF3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.63■□□□□ 0.73
NPIPA2E9PIF3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPIPA2E9PIF3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
NPIPA2E9PIF3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPIPA2E9PIF3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NPIPA2E9PIF3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPIPA2E9PIF3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NPIPA2E9PIF3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NPIPA2E9PIF3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.63■□□□□ 0.73
NPIPA2E9PIF3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.63■□□□□ 0.73
NPIPA2E9PIF3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.63■□□□□ 0.73
NPIPA2E9PIF3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
NPIPA2E9PIF3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPIPA2E9PIF3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPIPA2E9PIF3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NPIPA2E9PIF3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPA2E9PIF3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPA2E9PIF3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.62■□□□□ 0.73
NPIPA2E9PIF3 PKD1P6-201ENST00000343738 4769 ntBASIC19.62■□□□□ 0.73
NPIPA2E9PIF3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NPIPA2E9PIF3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NPIPA2E9PIF3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.62■□□□□ 0.73
NPIPA2E9PIF3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.62■□□□□ 0.73
NPIPA2E9PIF3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPA2E9PIF3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms