Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
C4orf47A7E2U8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
C4orf47A7E2U8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
C4orf47A7E2U8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C4orf47A7E2U8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
C4orf47A7E2U8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
C4orf47A7E2U8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
C4orf47A7E2U8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
C4orf47A7E2U8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.25■□□□□ 0.99
C4orf47A7E2U8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
C4orf47A7E2U8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
C4orf47A7E2U8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.25■□□□□ 0.99
C4orf47A7E2U8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
C4orf47A7E2U8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
C4orf47A7E2U8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
C4orf47A7E2U8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
C4orf47A7E2U8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
C4orf47A7E2U8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
C4orf47A7E2U8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
C4orf47A7E2U8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
C4orf47A7E2U8 AP006294.2-201ENST00000641667 209 ntBASIC21.24■□□□□ 0.99
C4orf47A7E2U8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.24■□□□□ 0.99
C4orf47A7E2U8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.23■□□□□ 0.99
C4orf47A7E2U8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
C4orf47A7E2U8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
C4orf47A7E2U8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
C4orf47A7E2U8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.23■□□□□ 0.99
C4orf47A7E2U8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.23■□□□□ 0.99
C4orf47A7E2U8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.23■□□□□ 0.99
C4orf47A7E2U8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
C4orf47A7E2U8 AC009237.3-201ENST00000393279 1427 ntBASIC21.22■□□□□ 0.99
C4orf47A7E2U8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
C4orf47A7E2U8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
C4orf47A7E2U8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
C4orf47A7E2U8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
C4orf47A7E2U8 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.22■□□□□ 0.99
C4orf47A7E2U8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.22■□□□□ 0.99
C4orf47A7E2U8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.22■□□□□ 0.99
C4orf47A7E2U8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
C4orf47A7E2U8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
C4orf47A7E2U8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.22■□□□□ 0.99
C4orf47A7E2U8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
C4orf47A7E2U8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
C4orf47A7E2U8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
C4orf47A7E2U8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
C4orf47A7E2U8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
C4orf47A7E2U8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
C4orf47A7E2U8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.21■□□□□ 0.99
C4orf47A7E2U8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
C4orf47A7E2U8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.2■□□□□ 0.99
C4orf47A7E2U8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
C4orf47A7E2U8 DUSP5P2-201ENST00000426873 1033 ntBASIC21.2■□□□□ 0.98
C4orf47A7E2U8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
C4orf47A7E2U8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.2■□□□□ 0.98
C4orf47A7E2U8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
C4orf47A7E2U8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
C4orf47A7E2U8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
C4orf47A7E2U8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.2■□□□□ 0.98
C4orf47A7E2U8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
C4orf47A7E2U8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
C4orf47A7E2U8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
C4orf47A7E2U8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
C4orf47A7E2U8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.19■□□□□ 0.98
C4orf47A7E2U8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.19■□□□□ 0.98
C4orf47A7E2U8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.19■□□□□ 0.98
C4orf47A7E2U8 SLC7A5P1-201ENST00000568957 537 ntBASIC21.19■□□□□ 0.98
C4orf47A7E2U8 AC010536.3-201ENST00000620306 533 ntBASIC21.19■□□□□ 0.98
C4orf47A7E2U8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.19■□□□□ 0.98
C4orf47A7E2U8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
C4orf47A7E2U8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.19■□□□□ 0.98
C4orf47A7E2U8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 AP003733.4-201ENST00000623785 1697 ntBASIC21.18■□□□□ 0.98
C4orf47A7E2U8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 MIPEPP3-201ENST00000412105 444 ntBASIC21.18■□□□□ 0.98
C4orf47A7E2U8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.18■□□□□ 0.98
C4orf47A7E2U8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 AC098590.1-201ENST00000468126 897 ntBASIC21.18■□□□□ 0.98
C4orf47A7E2U8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C4orf47A7E2U8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.17■□□□□ 0.98
C4orf47A7E2U8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C4orf47A7E2U8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
C4orf47A7E2U8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C4orf47A7E2U8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
C4orf47A7E2U8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C4orf47A7E2U8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C4orf47A7E2U8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.17■□□□□ 0.98
C4orf47A7E2U8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C4orf47A7E2U8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms