Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.41■□□□□ 0.54
TMEM235A6NFC5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM235A6NFC5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM235A6NFC5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM235A6NFC5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM235A6NFC5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM235A6NFC5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM235A6NFC5 TSPY13P-201ENST00000338964 914 ntBASIC18.4■□□□□ 0.54
TMEM235A6NFC5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM235A6NFC5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM235A6NFC5 MIR6722-201ENST00000617286 78 ntBASIC18.4■□□□□ 0.54
TMEM235A6NFC5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM235A6NFC5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM235A6NFC5 FEM1AP4-201ENST00000443167 1987 ntBASIC18.4■□□□□ 0.54
TMEM235A6NFC5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM235A6NFC5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM235A6NFC5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM235A6NFC5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM235A6NFC5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM235A6NFC5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TMEM235A6NFC5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TMEM235A6NFC5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
TMEM235A6NFC5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM235A6NFC5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.39■□□□□ 0.53
TMEM235A6NFC5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM235A6NFC5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.39■□□□□ 0.53
TMEM235A6NFC5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.39■□□□□ 0.53
TMEM235A6NFC5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM235A6NFC5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM235A6NFC5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM235A6NFC5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TMEM235A6NFC5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM235A6NFC5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM235A6NFC5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM235A6NFC5 AL157384.1-201ENST00000445995 2473 ntBASIC18.39■□□□□ 0.53
TMEM235A6NFC5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.39■□□□□ 0.53
TMEM235A6NFC5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 AC137630.3-201ENST00000607245 391 ntBASIC18.38■□□□□ 0.53
TMEM235A6NFC5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TMEM235A6NFC5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM235A6NFC5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM235A6NFC5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TMEM235A6NFC5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM235A6NFC5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM235A6NFC5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM235A6NFC5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TMEM235A6NFC5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM235A6NFC5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TMEM235A6NFC5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM235A6NFC5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM235A6NFC5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.36■□□□□ 0.53
TMEM235A6NFC5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM235A6NFC5 AC103834.1-201ENST00000520383 144 ntBASIC18.36■□□□□ 0.53
TMEM235A6NFC5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM235A6NFC5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM235A6NFC5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms