Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF222A6NCQ9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF222A6NCQ9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF222A6NCQ9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF222A6NCQ9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF222A6NCQ9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF222A6NCQ9 RPS2P7-201ENST00000447334 885 ntBASIC17.61■□□□□ 0.41
RNF222A6NCQ9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF222A6NCQ9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF222A6NCQ9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF222A6NCQ9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF222A6NCQ9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF222A6NCQ9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF222A6NCQ9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF222A6NCQ9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF222A6NCQ9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF222A6NCQ9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF222A6NCQ9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF222A6NCQ9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF222A6NCQ9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF222A6NCQ9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF222A6NCQ9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RNF222A6NCQ9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF222A6NCQ9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF222A6NCQ9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF222A6NCQ9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF222A6NCQ9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 AC087289.5-201ENST00000586076 3175 ntBASIC17.59■□□□□ 0.41
RNF222A6NCQ9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RNF222A6NCQ9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF222A6NCQ9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF222A6NCQ9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.58■□□□□ 0.41
RNF222A6NCQ9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF222A6NCQ9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF222A6NCQ9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF222A6NCQ9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF222A6NCQ9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF222A6NCQ9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF222A6NCQ9 GABARAPL3-202ENST00000624044 1851 ntBASIC17.58■□□□□ 0.4
RNF222A6NCQ9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RNF222A6NCQ9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
RNF222A6NCQ9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF222A6NCQ9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RNF222A6NCQ9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 RPS2P35-201ENST00000443417 897 ntBASIC17.56■□□□□ 0.4
RNF222A6NCQ9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF222A6NCQ9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNF222A6NCQ9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms