Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TCRBV5S1A1TA0A578 PBX2P1-201ENST00000493219 1291 ntBASIC22.7■■□□□ 1.22
TCRBV5S1A1TA0A578 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.7■■□□□ 1.22
TCRBV5S1A1TA0A578 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.7■■□□□ 1.22
TCRBV5S1A1TA0A578 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TCRBV5S1A1TA0A578 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.7■■□□□ 1.22
TCRBV5S1A1TA0A578 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TCRBV5S1A1TA0A578 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TCRBV5S1A1TA0A578 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TCRBV5S1A1TA0A578 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.7■■□□□ 1.22
TCRBV5S1A1TA0A578 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TCRBV5S1A1TA0A578 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TCRBV5S1A1TA0A578 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TCRBV5S1A1TA0A578 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TCRBV5S1A1TA0A578 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.69■■□□□ 1.22
TCRBV5S1A1TA0A578 AC026471.6-201ENST00000622954 1905 ntBASIC22.69■■□□□ 1.22
TCRBV5S1A1TA0A578 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TCRBV5S1A1TA0A578 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.69■■□□□ 1.22
TCRBV5S1A1TA0A578 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TCRBV5S1A1TA0A578 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TCRBV5S1A1TA0A578 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TCRBV5S1A1TA0A578 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.69■■□□□ 1.22
TCRBV5S1A1TA0A578 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TCRBV5S1A1TA0A578 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TCRBV5S1A1TA0A578 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TCRBV5S1A1TA0A578 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TCRBV5S1A1TA0A578 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TCRBV5S1A1TA0A578 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.68■■□□□ 1.22
TCRBV5S1A1TA0A578 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
TCRBV5S1A1TA0A578 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TCRBV5S1A1TA0A578 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.68■■□□□ 1.22
TCRBV5S1A1TA0A578 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.68■■□□□ 1.22
TCRBV5S1A1TA0A578 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.68■■□□□ 1.22
TCRBV5S1A1TA0A578 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TCRBV5S1A1TA0A578 CLDN5-201ENST00000403084 2357 ntBASIC22.68■■□□□ 1.22
TCRBV5S1A1TA0A578 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TCRBV5S1A1TA0A578 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TCRBV5S1A1TA0A578 FBXW4P1-201ENST00000426721 2239 ntBASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 AP001330.3-201ENST00000520123 633 ntBASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.67■■□□□ 1.22
TCRBV5S1A1TA0A578 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TCRBV5S1A1TA0A578 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TCRBV5S1A1TA0A578 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TCRBV5S1A1TA0A578 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.66■■□□□ 1.22
TCRBV5S1A1TA0A578 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
TCRBV5S1A1TA0A578 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
TCRBV5S1A1TA0A578 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 EDA-201ENST00000338901 1233 ntBASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TCRBV5S1A1TA0A578 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TCRBV5S1A1TA0A578 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
TCRBV5S1A1TA0A578 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
TCRBV5S1A1TA0A578 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TCRBV5S1A1TA0A578 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
TCRBV5S1A1TA0A578 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TCRBV5S1A1TA0A578 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TCRBV5S1A1TA0A578 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TCRBV5S1A1TA0A578 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TCRBV5S1A1TA0A578 IGHV3-19-201ENST00000521488 291 ntBASIC22.64■■□□□ 1.21
TCRBV5S1A1TA0A578 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.64■■□□□ 1.21
TCRBV5S1A1TA0A578 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.64■■□□□ 1.21
TCRBV5S1A1TA0A578 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.64■■□□□ 1.21
TCRBV5S1A1TA0A578 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.64■■□□□ 1.21
TCRBV5S1A1TA0A578 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TCRBV5S1A1TA0A578 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TCRBV5S1A1TA0A578 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.64■■□□□ 1.21
TCRBV5S1A1TA0A578 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
TCRBV5S1A1TA0A578 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TCRBV5S1A1TA0A578 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.64■■□□□ 1.21
TCRBV5S1A1TA0A578 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms