Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRDV1A0A1B0GX56 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRDV1A0A1B0GX56 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRDV1A0A1B0GX56 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.02■□□□□ 0.63
TRDV1A0A1B0GX56 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRDV1A0A1B0GX56 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.01■□□□□ 0.63
TRDV1A0A1B0GX56 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TRDV1A0A1B0GX56 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRDV1A0A1B0GX56 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.01■□□□□ 0.63
TRDV1A0A1B0GX56 AC139795.1-202ENST00000500444 432 ntBASIC19.01■□□□□ 0.63
TRDV1A0A1B0GX56 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.01■□□□□ 0.63
TRDV1A0A1B0GX56 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.01■□□□□ 0.63
TRDV1A0A1B0GX56 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRDV1A0A1B0GX56 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRDV1A0A1B0GX56 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.01■□□□□ 0.63
TRDV1A0A1B0GX56 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 LINC01006-201ENST00000333319 2292 ntBASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 AC004687.1-201ENST00000579003 1625 ntBASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19■□□□□ 0.63
TRDV1A0A1B0GX56 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRDV1A0A1B0GX56 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRDV1A0A1B0GX56 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 U85056.1-201ENST00000616429 682 ntBASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRDV1A0A1B0GX56 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRDV1A0A1B0GX56 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms