Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-6A0A0B4J262 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
TRAV8-6A0A0B4J262 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TRAV8-6A0A0B4J262 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-6A0A0B4J262 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-6A0A0B4J262 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-6A0A0B4J262 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 AF131216.4-201ENST00000638924 1588 ntBASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 TK2-202ENST00000417693 1046 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 CD37-213ENST00000598095 1598 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-6A0A0B4J262 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
TRAV8-6A0A0B4J262 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRAV8-6A0A0B4J262 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-6A0A0B4J262 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRAV8-6A0A0B4J262 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-6A0A0B4J262 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-6A0A0B4J262 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRAV8-6A0A0B4J262 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-6A0A0B4J262 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRAV8-6A0A0B4J262 AC009299.2-201ENST00000482477 511 ntBASIC15.77■□□□□ 0.12
TRAV8-6A0A0B4J262 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-6A0A0B4J262 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRAV8-6A0A0B4J262 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV8-6A0A0B4J262 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAV8-6A0A0B4J262 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV8-6A0A0B4J262 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV8-6A0A0B4J262 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV8-6A0A0B4J262 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAV8-6A0A0B4J262 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAV8-6A0A0B4J262 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV8-6A0A0B4J262 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 AL451085.2-201ENST00000605085 799 ntBASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV8-6A0A0B4J262 AC021242.3-201ENST00000607598 1377 ntBASIC15.75■□□□□ 0.11
TRAV8-6A0A0B4J262 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms