Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV7-1A0A0A6YYK4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV7-1A0A0A6YYK4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV7-1A0A0A6YYK4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV7-1A0A0A6YYK4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV7-1A0A0A6YYK4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV7-1A0A0A6YYK4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRBV7-1A0A0A6YYK4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TRBV7-1A0A0A6YYK4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.79■□□□□ 0.28
TRBV7-1A0A0A6YYK4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
TRBV7-1A0A0A6YYK4 AC133561.4-201ENST00000566112 224 ntBASIC16.79■□□□□ 0.28
TRBV7-1A0A0A6YYK4 AL355001.2-201ENST00000620617 1191 ntBASIC16.79■□□□□ 0.28
TRBV7-1A0A0A6YYK4 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV7-1A0A0A6YYK4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRBV7-1A0A0A6YYK4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV7-1A0A0A6YYK4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV7-1A0A0A6YYK4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV7-1A0A0A6YYK4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV7-1A0A0A6YYK4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 AL034346.1-201ENST00000568244 1277 ntBASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 AC008764.7-201ENST00000593779 1081 ntBASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 AC110285.6-201ENST00000617652 491 ntBASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV7-1A0A0A6YYK4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV7-1A0A0A6YYK4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV7-1A0A0A6YYK4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV7-1A0A0A6YYK4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV7-1A0A0A6YYK4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV7-1A0A0A6YYK4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV7-1A0A0A6YYK4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV7-1A0A0A6YYK4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV7-1A0A0A6YYK4 AL139246.5-201ENST00000606645 996 ntBASIC16.77■□□□□ 0.28
TRBV7-1A0A0A6YYK4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV7-1A0A0A6YYK4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV7-1A0A0A6YYK4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV7-1A0A0A6YYK4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV7-1A0A0A6YYK4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 AC099791.1-201ENST00000416440 715 ntBASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 IGHV3-19-201ENST00000521488 291 ntBASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV7-1A0A0A6YYK4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV7-1A0A0A6YYK4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRBV7-1A0A0A6YYK4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRBV7-1A0A0A6YYK4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRBV7-1A0A0A6YYK4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV7-1A0A0A6YYK4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV7-1A0A0A6YYK4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV7-1A0A0A6YYK4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV7-1A0A0A6YYK4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TRBV7-1A0A0A6YYK4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRBV7-1A0A0A6YYK4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRBV7-1A0A0A6YYK4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms