Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-1A0A0A6YYK1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 AC103834.1-201ENST00000520383 144 ntBASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 AC103724.3-201ENST00000564481 992 ntBASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRAV8-1A0A0A6YYK1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 AC137630.3-201ENST00000607245 391 ntBASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 CA15P2-201ENST00000611168 834 ntBASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-1A0A0A6YYK1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-1A0A0A6YYK1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-1A0A0A6YYK1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
TRAV8-1A0A0A6YYK1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRAV8-1A0A0A6YYK1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-1A0A0A6YYK1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-1A0A0A6YYK1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-1A0A0A6YYK1 MIR6722-201ENST00000617286 78 ntBASIC16.36■□□□□ 0.21
TRAV8-1A0A0A6YYK1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-1A0A0A6YYK1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-1A0A0A6YYK1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-1A0A0A6YYK1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-1A0A0A6YYK1 AL157384.1-201ENST00000445995 2473 ntBASIC16.36■□□□□ 0.21
TRAV8-1A0A0A6YYK1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-1A0A0A6YYK1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-1A0A0A6YYK1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-1A0A0A6YYK1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-1A0A0A6YYK1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-1A0A0A6YYK1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV8-1A0A0A6YYK1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRAV8-1A0A0A6YYK1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-1A0A0A6YYK1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-1A0A0A6YYK1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.35■□□□□ 0.21
TRAV8-1A0A0A6YYK1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRAV8-1A0A0A6YYK1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.35■□□□□ 0.21
TRAV8-1A0A0A6YYK1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV8-1A0A0A6YYK1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-1A0A0A6YYK1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-1A0A0A6YYK1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRAV8-1A0A0A6YYK1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-1A0A0A6YYK1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 YBX1P4-201ENST00000392794 808 ntBASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms