Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 AL499627.2-201ENST00000606283 725 ntBASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 AC244015.2-201ENST00000616358 1861 ntBASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 AC239859.2-201ENST00000444165 318 ntBASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-7A0A0A0MS04 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV6-7A0A0A0MS04 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV6-7A0A0A0MS04 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV6-7A0A0A0MS04 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV6-7A0A0A0MS04 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.05■□□□□ 0.48
TRBV6-7A0A0A0MS04 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV6-7A0A0A0MS04 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV6-7A0A0A0MS04 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV6-7A0A0A0MS04 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV6-7A0A0A0MS04 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV6-7A0A0A0MS04 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV6-7A0A0A0MS04 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV6-7A0A0A0MS04 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV6-7A0A0A0MS04 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV6-7A0A0A0MS04 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
TRBV6-7A0A0A0MS04 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV6-7A0A0A0MS04 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV6-7A0A0A0MS04 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV6-7A0A0A0MS04 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV6-7A0A0A0MS04 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV6-7A0A0A0MS04 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRBV6-7A0A0A0MS04 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV6-7A0A0A0MS04 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV6-7A0A0A0MS04 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV6-7A0A0A0MS04 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRBV6-7A0A0A0MS04 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 TSPY9P-201ENST00000440215 945 ntBASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 TSPY11P-201ENST00000442607 1045 ntBASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV6-7A0A0A0MS04 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.02■□□□□ 0.48
TRBV6-7A0A0A0MS04 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRBV6-7A0A0A0MS04 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
TRBV6-7A0A0A0MS04 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV6-7A0A0A0MS04 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV6-7A0A0A0MS04 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV6-7A0A0A0MS04 RARRES2P1-201ENST00000474487 481 ntBASIC18.02■□□□□ 0.48
TRBV6-7A0A0A0MS04 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.02■□□□□ 0.48
TRBV6-7A0A0A0MS04 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.02■□□□□ 0.48
TRBV6-7A0A0A0MS04 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.02■□□□□ 0.47
TRBV6-7A0A0A0MS04 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBV6-7A0A0A0MS04 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.02■□□□□ 0.47
TRBV6-7A0A0A0MS04 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.02■□□□□ 0.47
TRBV6-7A0A0A0MS04 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.02■□□□□ 0.47
TRBV6-7A0A0A0MS04 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBV6-7A0A0A0MS04 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms