Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAV27A0A087WT01 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV27A0A087WT01 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV27A0A087WT01 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV27A0A087WT01 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV27A0A087WT01 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.55■□□□□ 0.72
TRAV27A0A087WT01 AL512631.2-201ENST00000604634 923 ntBASIC19.55■□□□□ 0.72
TRAV27A0A087WT01 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV27A0A087WT01 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV27A0A087WT01 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV27A0A087WT01 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.55■□□□□ 0.72
TRAV27A0A087WT01 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
TRAV27A0A087WT01 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV27A0A087WT01 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV27A0A087WT01 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV27A0A087WT01 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 AL356441.2-201ENST00000443009 864 ntBASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 AC079089.2-201ENST00000531211 1277 ntBASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.53■□□□□ 0.72
TRAV27A0A087WT01 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV27A0A087WT01 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms