Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00308Q8TCZ7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC00308Q8TCZ7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00308Q8TCZ7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LINC00308Q8TCZ7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LINC00308Q8TCZ7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00308Q8TCZ7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LINC00308Q8TCZ7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00308Q8TCZ7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00308Q8TCZ7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00308Q8TCZ7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00308Q8TCZ7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00308Q8TCZ7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC00308Q8TCZ7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
LINC00308Q8TCZ7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LINC00308Q8TCZ7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00308Q8TCZ7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00308Q8TCZ7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00308Q8TCZ7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC00308Q8TCZ7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00308Q8TCZ7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00308Q8TCZ7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00308Q8TCZ7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00308Q8TCZ7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LINC00308Q8TCZ7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00308Q8TCZ7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00308Q8TCZ7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00308Q8TCZ7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC00308Q8TCZ7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC00308Q8TCZ7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00308Q8TCZ7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC00308Q8TCZ7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00308Q8TCZ7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00308Q8TCZ7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LINC00308Q8TCZ7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00308Q8TCZ7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC00308Q8TCZ7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00308Q8TCZ7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00308Q8TCZ7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC00308Q8TCZ7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC00308Q8TCZ7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LINC00308Q8TCZ7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC00308Q8TCZ7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC00308Q8TCZ7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.99■□□□□ 0.47
LINC00308Q8TCZ7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.99■□□□□ 0.47
LINC00308Q8TCZ7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00308Q8TCZ7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00308Q8TCZ7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC00308Q8TCZ7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00308Q8TCZ7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC17.97■□□□□ 0.47
LINC00308Q8TCZ7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC00308Q8TCZ7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LINC00308Q8TCZ7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC00308Q8TCZ7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
LINC00308Q8TCZ7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00308Q8TCZ7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.95■□□□□ 0.46
LINC00308Q8TCZ7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00308Q8TCZ7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LINC00308Q8TCZ7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00308Q8TCZ7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LINC00308Q8TCZ7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00308Q8TCZ7 ST7-AS1-201ENST00000456775 1889 ntBASIC17.94■□□□□ 0.46
LINC00308Q8TCZ7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
LINC00308Q8TCZ7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00308Q8TCZ7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00308Q8TCZ7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00308Q8TCZ7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.93■□□□□ 0.46
LINC00308Q8TCZ7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00308Q8TCZ7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00308Q8TCZ7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LINC00308Q8TCZ7 AC142086.6-201ENST00000621154 1765 ntBASIC17.92■□□□□ 0.46
LINC00308Q8TCZ7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00308Q8TCZ7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00308Q8TCZ7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00308Q8TCZ7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC00308Q8TCZ7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.9■□□□□ 0.46
LINC00308Q8TCZ7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00308Q8TCZ7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LINC00308Q8TCZ7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LINC00308Q8TCZ7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.89■□□□□ 0.45
LINC00308Q8TCZ7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00308Q8TCZ7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00308Q8TCZ7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00308Q8TCZ7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC17.87■□□□□ 0.45
LINC00308Q8TCZ7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00308Q8TCZ7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00308Q8TCZ7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00308Q8TCZ7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00308Q8TCZ7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00308Q8TCZ7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00308Q8TCZ7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00308Q8TCZ7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LINC00308Q8TCZ7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00308Q8TCZ7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00308Q8TCZ7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00308Q8TCZ7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00308Q8TCZ7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC00308Q8TCZ7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
LINC00308Q8TCZ7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00308Q8TCZ7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms