Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HIST3H2BBQ8N257 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HIST3H2BBQ8N257 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HIST3H2BBQ8N257 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.73■□□□□ 0.91
HIST3H2BBQ8N257 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.72■□□□□ 0.91
HIST3H2BBQ8N257 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.71■□□□□ 0.91
HIST3H2BBQ8N257 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST3H2BBQ8N257 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.71■□□□□ 0.91
HIST3H2BBQ8N257 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST3H2BBQ8N257 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST3H2BBQ8N257 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
HIST3H2BBQ8N257 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.7■□□□□ 0.9
HIST3H2BBQ8N257 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIST3H2BBQ8N257 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIST3H2BBQ8N257 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIST3H2BBQ8N257 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIST3H2BBQ8N257 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.68■□□□□ 0.9
HIST3H2BBQ8N257 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HIST3H2BBQ8N257 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.66■□□□□ 0.9
HIST3H2BBQ8N257 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST3H2BBQ8N257 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST3H2BBQ8N257 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST3H2BBQ8N257 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIST3H2BBQ8N257 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST3H2BBQ8N257 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST3H2BBQ8N257 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST3H2BBQ8N257 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST3H2BBQ8N257 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.63■□□□□ 0.89
HIST3H2BBQ8N257 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST3H2BBQ8N257 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST3H2BBQ8N257 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST3H2BBQ8N257 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.63■□□□□ 0.89
HIST3H2BBQ8N257 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
HIST3H2BBQ8N257 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.62■□□□□ 0.89
HIST3H2BBQ8N257 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HIST3H2BBQ8N257 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.61■□□□□ 0.89
HIST3H2BBQ8N257 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST3H2BBQ8N257 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST3H2BBQ8N257 AC142086.6-201ENST00000621154 1765 ntBASIC20.61■□□□□ 0.89
HIST3H2BBQ8N257 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST3H2BBQ8N257 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST3H2BBQ8N257 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST3H2BBQ8N257 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST3H2BBQ8N257 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HIST3H2BBQ8N257 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HIST3H2BBQ8N257 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HIST3H2BBQ8N257 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HIST3H2BBQ8N257 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST3H2BBQ8N257 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIST3H2BBQ8N257 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.56■□□□□ 0.88
HIST3H2BBQ8N257 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST3H2BBQ8N257 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST3H2BBQ8N257 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST3H2BBQ8N257 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HIST3H2BBQ8N257 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST3H2BBQ8N257 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST3H2BBQ8N257 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.54■□□□□ 0.88
HIST3H2BBQ8N257 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HIST3H2BBQ8N257 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST3H2BBQ8N257 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST3H2BBQ8N257 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HIST3H2BBQ8N257 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST3H2BBQ8N257 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.52■□□□□ 0.88
HIST3H2BBQ8N257 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HIST3H2BBQ8N257 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
HIST3H2BBQ8N257 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HIST3H2BBQ8N257 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HIST3H2BBQ8N257 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.52■□□□□ 0.87
HIST3H2BBQ8N257 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST3H2BBQ8N257 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
HIST3H2BBQ8N257 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.5■□□□□ 0.87
HIST3H2BBQ8N257 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.5■□□□□ 0.87
HIST3H2BBQ8N257 AL121749.1-202ENST00000609313 2153 ntBASIC20.5■□□□□ 0.87
HIST3H2BBQ8N257 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST3H2BBQ8N257 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST3H2BBQ8N257 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST3H2BBQ8N257 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST3H2BBQ8N257 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST3H2BBQ8N257 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST3H2BBQ8N257 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HIST3H2BBQ8N257 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HIST3H2BBQ8N257 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST3H2BBQ8N257 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HIST3H2BBQ8N257 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.46■□□□□ 0.87
HIST3H2BBQ8N257 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HIST3H2BBQ8N257 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
HIST3H2BBQ8N257 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H2BBQ8N257 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H2BBQ8N257 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H2BBQ8N257 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST3H2BBQ8N257 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HIST3H2BBQ8N257 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HIST3H2BBQ8N257 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST3H2BBQ8N257 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.42■□□□□ 0.86
HIST3H2BBQ8N257 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.42■□□□□ 0.86
HIST3H2BBQ8N257 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST3H2BBQ8N257 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST3H2BBQ8N257 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.41■□□□□ 0.86
HIST3H2BBQ8N257 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST3H2BBQ8N257 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms