Protein–RNA interactions for Protein: Q5VVX9

UBE2U, Ubiquitin-conjugating enzyme E2 U, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2UQ5VVX9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBE2UQ5VVX9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBE2UQ5VVX9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC24.55■■□□□ 1.52
UBE2UQ5VVX9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBE2UQ5VVX9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
UBE2UQ5VVX9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
UBE2UQ5VVX9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
UBE2UQ5VVX9 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
UBE2UQ5VVX9 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
UBE2UQ5VVX9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
UBE2UQ5VVX9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
UBE2UQ5VVX9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
UBE2UQ5VVX9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
UBE2UQ5VVX9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
UBE2UQ5VVX9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
UBE2UQ5VVX9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
UBE2UQ5VVX9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
UBE2UQ5VVX9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.44■■□□□ 1.5
UBE2UQ5VVX9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
UBE2UQ5VVX9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
UBE2UQ5VVX9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
UBE2UQ5VVX9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
UBE2UQ5VVX9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
UBE2UQ5VVX9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
UBE2UQ5VVX9 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
UBE2UQ5VVX9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.41■■□□□ 1.5
UBE2UQ5VVX9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
UBE2UQ5VVX9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.41■■□□□ 1.5
UBE2UQ5VVX9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
UBE2UQ5VVX9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
UBE2UQ5VVX9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.39■■□□□ 1.49
UBE2UQ5VVX9 ST7-AS1-201ENST00000456775 1889 ntBASIC24.38■■□□□ 1.49
UBE2UQ5VVX9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
UBE2UQ5VVX9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
UBE2UQ5VVX9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
UBE2UQ5VVX9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.37■■□□□ 1.49
UBE2UQ5VVX9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
UBE2UQ5VVX9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
UBE2UQ5VVX9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
UBE2UQ5VVX9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.36■■□□□ 1.49
UBE2UQ5VVX9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBE2UQ5VVX9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.35■■□□□ 1.49
UBE2UQ5VVX9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
UBE2UQ5VVX9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBE2UQ5VVX9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.33■■□□□ 1.49
UBE2UQ5VVX9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC24.33■■□□□ 1.49
UBE2UQ5VVX9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
UBE2UQ5VVX9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
UBE2UQ5VVX9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
UBE2UQ5VVX9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
UBE2UQ5VVX9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.3■■□□□ 1.48
UBE2UQ5VVX9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
UBE2UQ5VVX9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
UBE2UQ5VVX9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
UBE2UQ5VVX9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
UBE2UQ5VVX9 AC015813.7-201ENST00000623294 581 ntBASIC24.29■■□□□ 1.48
UBE2UQ5VVX9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC24.29■■□□□ 1.48
UBE2UQ5VVX9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
UBE2UQ5VVX9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
UBE2UQ5VVX9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
UBE2UQ5VVX9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.28■■□□□ 1.48
UBE2UQ5VVX9 AC142086.6-201ENST00000621154 1765 ntBASIC24.27■■□□□ 1.48
UBE2UQ5VVX9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
UBE2UQ5VVX9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
UBE2UQ5VVX9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
UBE2UQ5VVX9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.26■■□□□ 1.47
UBE2UQ5VVX9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
UBE2UQ5VVX9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
UBE2UQ5VVX9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
UBE2UQ5VVX9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
UBE2UQ5VVX9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
UBE2UQ5VVX9 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
UBE2UQ5VVX9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.24■■□□□ 1.47
UBE2UQ5VVX9 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC24.24■■□□□ 1.47
UBE2UQ5VVX9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
UBE2UQ5VVX9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC24.23■■□□□ 1.47
UBE2UQ5VVX9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
UBE2UQ5VVX9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.21■■□□□ 1.47
UBE2UQ5VVX9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
UBE2UQ5VVX9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
UBE2UQ5VVX9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
UBE2UQ5VVX9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
UBE2UQ5VVX9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
UBE2UQ5VVX9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
UBE2UQ5VVX9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
UBE2UQ5VVX9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
UBE2UQ5VVX9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
UBE2UQ5VVX9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
UBE2UQ5VVX9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
UBE2UQ5VVX9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
UBE2UQ5VVX9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
UBE2UQ5VVX9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
UBE2UQ5VVX9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
UBE2UQ5VVX9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
UBE2UQ5VVX9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
UBE2UQ5VVX9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
UBE2UQ5VVX9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
UBE2UQ5VVX9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
UBE2UQ5VVX9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.1■■□□□ 1.45
UBE2UQ5VVX9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms