Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.79
COL13A1Q5TAT6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
COL13A1Q5TAT6 AC019069.1-201ENST00000610008 1333 ntBASIC32.51■■■□□ 2.79
COL13A1Q5TAT6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
COL13A1Q5TAT6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
COL13A1Q5TAT6 ABHD17AP5-201ENST00000580133 923 ntBASIC32.48■■■□□ 2.79
COL13A1Q5TAT6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.47■■■□□ 2.79
COL13A1Q5TAT6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.47■■■□□ 2.79
COL13A1Q5TAT6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
COL13A1Q5TAT6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.46■■■□□ 2.79
COL13A1Q5TAT6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
COL13A1Q5TAT6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.44■■■□□ 2.78
COL13A1Q5TAT6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
COL13A1Q5TAT6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC32.43■■■□□ 2.78
COL13A1Q5TAT6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
COL13A1Q5TAT6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
COL13A1Q5TAT6 RARRES2P2-201ENST00000394842 485 ntBASIC32.4■■■□□ 2.78
COL13A1Q5TAT6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
COL13A1Q5TAT6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
COL13A1Q5TAT6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
COL13A1Q5TAT6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC32.38■■■□□ 2.77
COL13A1Q5TAT6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.38■■■□□ 2.77
COL13A1Q5TAT6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
COL13A1Q5TAT6 AC021231.2-201ENST00000594613 730 ntBASIC32.37■■■□□ 2.77
COL13A1Q5TAT6 CR559946.2-201ENST00000623684 991 ntBASIC32.37■■■□□ 2.77
COL13A1Q5TAT6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
COL13A1Q5TAT6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
COL13A1Q5TAT6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
COL13A1Q5TAT6 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.34■■■□□ 2.77
COL13A1Q5TAT6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
COL13A1Q5TAT6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.31■■■□□ 2.76
COL13A1Q5TAT6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
COL13A1Q5TAT6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC32.28■■■□□ 2.76
COL13A1Q5TAT6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.27■■■□□ 2.76
COL13A1Q5TAT6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC32.26■■■□□ 2.75
COL13A1Q5TAT6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
COL13A1Q5TAT6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC32.24■■■□□ 2.75
COL13A1Q5TAT6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.22■■■□□ 2.75
COL13A1Q5TAT6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
COL13A1Q5TAT6 AC145285.7-201ENST00000614819 1539 ntBASIC32.21■■■□□ 2.75
COL13A1Q5TAT6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.21■■■□□ 2.75
COL13A1Q5TAT6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
COL13A1Q5TAT6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.2■■■□□ 2.74
COL13A1Q5TAT6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
COL13A1Q5TAT6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
COL13A1Q5TAT6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
COL13A1Q5TAT6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC32.19■■■□□ 2.74
COL13A1Q5TAT6 DUX4L11-201ENST00000611504 1267 ntBASIC32.19■■■□□ 2.74
COL13A1Q5TAT6 DUX4L12-201ENST00000614593 1267 ntBASIC32.19■■■□□ 2.74
COL13A1Q5TAT6 DUX4L14-201ENST00000621227 1267 ntBASIC32.19■■■□□ 2.74
COL13A1Q5TAT6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
COL13A1Q5TAT6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC32.17■■■□□ 2.74
COL13A1Q5TAT6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
COL13A1Q5TAT6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC32.15■■■□□ 2.74
COL13A1Q5TAT6 AC018358.1-201ENST00000631079 1402 ntBASIC32.15■■■□□ 2.74
COL13A1Q5TAT6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
COL13A1Q5TAT6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC32.14■■■□□ 2.74
COL13A1Q5TAT6 AC012354.3-201ENST00000623734 483 ntBASIC32.13■■■□□ 2.73
COL13A1Q5TAT6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
COL13A1Q5TAT6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
COL13A1Q5TAT6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.1■■■□□ 2.73
COL13A1Q5TAT6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.09■■■□□ 2.73
COL13A1Q5TAT6 AL592295.1-201ENST00000400984 884 ntBASIC32.08■■■□□ 2.73
COL13A1Q5TAT6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC32.05■■■□□ 2.72
COL13A1Q5TAT6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
COL13A1Q5TAT6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
COL13A1Q5TAT6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32■■■□□ 2.71
COL13A1Q5TAT6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32■■■□□ 2.71
COL13A1Q5TAT6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
COL13A1Q5TAT6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.99■■■□□ 2.71
COL13A1Q5TAT6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
COL13A1Q5TAT6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.99■■■□□ 2.71
COL13A1Q5TAT6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.98■■■□□ 2.71
COL13A1Q5TAT6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.98■■■□□ 2.71
COL13A1Q5TAT6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
COL13A1Q5TAT6 LINC01971-201ENST00000617888 1048 ntBASIC31.97■■■□□ 2.71
COL13A1Q5TAT6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
COL13A1Q5TAT6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
COL13A1Q5TAT6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.96■■■□□ 2.71
COL13A1Q5TAT6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.95■■■□□ 2.71
COL13A1Q5TAT6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
COL13A1Q5TAT6 NTF6A-201ENST00000591175 560 ntBASIC31.93■■■□□ 2.7
COL13A1Q5TAT6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.91■■■□□ 2.7
COL13A1Q5TAT6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.91■■■□□ 2.7
COL13A1Q5TAT6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.91■■■□□ 2.7
COL13A1Q5TAT6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
COL13A1Q5TAT6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
COL13A1Q5TAT6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
COL13A1Q5TAT6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
COL13A1Q5TAT6 MIR935-201ENST00000401179 91 ntBASIC31.88■■■□□ 2.69
COL13A1Q5TAT6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.88■■■□□ 2.69
COL13A1Q5TAT6 AL033527.3-201ENST00000566366 1196 ntBASIC31.87■■■□□ 2.69
COL13A1Q5TAT6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.87■■■□□ 2.69
COL13A1Q5TAT6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.87■■■□□ 2.69
COL13A1Q5TAT6 RNF126P1-201ENST00000567452 1320 ntBASIC31.86■■■□□ 2.69
COL13A1Q5TAT6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.85■■■□□ 2.69
COL13A1Q5TAT6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.85■■■□□ 2.69
COL13A1Q5TAT6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.85■■■□□ 2.69
COL13A1Q5TAT6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
COL13A1Q5TAT6 GPX1-201ENST00000419349 1106 ntBASIC31.83■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms