Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 PEX2YJL210W 816 nt10.29□□□□□ -0.76
HRD3Q05787 LSC2YGR244C 1284 nt10.28□□□□□ -0.76
HRD3Q05787 YML089CYML089C 369 nt10.27□□□□□ -0.77
HRD3Q05787 YMR226CYMR226C 804 nt10.27□□□□□ -0.77
HRD3Q05787 HIP1YGR191W 1812 nt10.27□□□□□ -0.77
HRD3Q05787 UTH1YKR042W 1098 nt10.26□□□□□ -0.77
HRD3Q05787 ARP6YLR085C 1317 nt10.25□□□□□ -0.77
HRD3Q05787 ATG15YCR068W 1563 nt10.23□□□□□ -0.77
HRD3Q05787 RTN2YDL204W 1182 nt10.23□□□□□ -0.77
HRD3Q05787 SDH5YOL071W 489 nt10.23□□□□□ -0.77
HRD3Q05787 YLR111WYLR111W 333 nt10.22□□□□□ -0.77
HRD3Q05787 TIF6YPR016C 738 nt10.22□□□□□ -0.77
HRD3Q05787 NRT1YOR071C 1797 nt10.21□□□□□ -0.78
HRD3Q05787 PLB1YMR008C 1995 nt10.18□□□□□ -0.78
HRD3Q05787 GAP1YKR039W 1809 nt10.17□□□□□ -0.78
HRD3Q05787 MET28YIR017C 564 nt10.17□□□□□ -0.78
HRD3Q05787 TSC10YBR265W 963 nt10.16□□□□□ -0.78
HRD3Q05787 YKR005CYKR005C 1578 nt10.16□□□□□ -0.78
HRD3Q05787 RAD23YEL037C 1197 nt10.15□□□□□ -0.78
HRD3Q05787 YGR259CYGR259C 441 nt10.15□□□□□ -0.78
HRD3Q05787 HSP60YLR259C 1719 nt10.15□□□□□ -0.78
HRD3Q05787 YGR012WYGR012W 1182 nt10.14□□□□□ -0.79
HRD3Q05787 CAB5YDR196C 726 nt10.13□□□□□ -0.79
HRD3Q05787 PRP4YPR178W 1398 nt10.1□□□□□ -0.79
HRD3Q05787 YLR279WYLR279W 390 nt10.09□□□□□ -0.79
HRD3Q05787 YLR437C-AYLR437C-A 228 nt10.09□□□□□ -0.79
HRD3Q05787 SAM1YLR180W 1149 nt10.08□□□□□ -0.8
HRD3Q05787 FIT3YOR383C 615 nt10.06□□□□□ -0.8
HRD3Q05787 UTR1YJR049C 1593 nt10.05□□□□□ -0.8
HRD3Q05787 MSB4YOL112W 1479 nt10.04□□□□□ -0.8
HRD3Q05787 RIB3YDR487C 627 nt10.04□□□□□ -0.8
HRD3Q05787 DIF1YLR437C 402 nt10.04□□□□□ -0.8
HRD3Q05787 DPS1YLL018C 1674 nt10.03□□□□□ -0.8
HRD3Q05787 RDN37-1RDN37-1 5354 nt10.02□□□□□ -0.81
HRD3Q05787 RDN37-2RDN37-2 5354 nt10.02□□□□□ -0.81
HRD3Q05787 BOR1YNL275W 1731 nt10.02□□□□□ -0.81
HRD3Q05787 BMT6YLR063W 1098 nt10.01□□□□□ -0.81
HRD3Q05787 YAR028WYAR028W 705 nt10□□□□□ -0.81
HRD3Q05787 ZTA1YBR046C 1005 nt9.98□□□□□ -0.81
HRD3Q05787 YPL222C-AYPL222C-A 246 nt9.96□□□□□ -0.82
HRD3Q05787 MTG2YHR168W 1557 nt9.96□□□□□ -0.82
HRD3Q05787 AKR2YOR034C 2250 nt9.95□□□□□ -0.82
HRD3Q05787 ALP1YNL270C 1722 nt9.94□□□□□ -0.82
HRD3Q05787 PRM5YIL117C 957 nt9.94□□□□□ -0.82
HRD3Q05787 IRC24YIR036C 792 nt9.93□□□□□ -0.82
HRD3Q05787 UME6YDR207C 2511 nt9.92□□□□□ -0.82
HRD3Q05787 SAM35YHR083W 990 nt9.89□□□□□ -0.83
HRD3Q05787 SNF1YDR477W 1902 nt9.89□□□□□ -0.83
HRD3Q05787 AAC1YMR056C 930 nt9.88□□□□□ -0.83
HRD3Q05787 GND1YHR183W 1470 nt9.87□□□□□ -0.83
HRD3Q05787 LOT5YKL183W 921 nt9.86□□□□□ -0.83
HRD3Q05787 YER190C-AYER190C-A 576 nt9.85□□□□□ -0.83
HRD3Q05787 YGR296C-AYGR296C-A 576 nt9.85□□□□□ -0.83
HRD3Q05787 YML133W-AYML133W-A 576 nt9.85□□□□□ -0.83
HRD3Q05787 YNL339W-AYNL339W-A 576 nt9.85□□□□□ -0.83
HRD3Q05787 YPL283W-AYPL283W-A 576 nt9.85□□□□□ -0.83
HRD3Q05787 SED1YDR077W 1017 nt9.84□□□□□ -0.83
HRD3Q05787 RAD51YER095W 1203 nt9.84□□□□□ -0.83
HRD3Q05787 ADH1YOL086C 1047 nt9.83□□□□□ -0.84
HRD3Q05787 YPI1YFR003C 468 nt9.82□□□□□ -0.84
HRD3Q05787 YJL195CYJL195C 702 nt9.81□□□□□ -0.84
HRD3Q05787 FCY21YER060W 1587 nt9.8□□□□□ -0.84
HRD3Q05787 SMM1YNR015W 1155 nt9.8□□□□□ -0.84
HRD3Q05787 FUN14YAL008W 597 nt9.79□□□□□ -0.84
HRD3Q05787 LIP1YMR298W 453 nt9.79□□□□□ -0.84
HRD3Q05787 YNR029CYNR029C 1290 nt9.79□□□□□ -0.84
HRD3Q05787 APT2YDR441C 546 nt9.78□□□□□ -0.84
HRD3Q05787 STE4YOR212W 1272 nt9.78□□□□□ -0.84
HRD3Q05787 ALD4YOR374W 1560 nt9.78□□□□□ -0.84
HRD3Q05787 UGA4YDL210W 1716 nt9.77□□□□□ -0.85
HRD3Q05787 YLR349WYLR349W 507 nt9.77□□□□□ -0.85
HRD3Q05787 DBP1YPL119C 1854 nt9.76□□□□□ -0.85
HRD3Q05787 HIF1YLL022C 1158 nt9.75□□□□□ -0.85
HRD3Q05787 YPL251WYPL251W 303 nt9.74□□□□□ -0.85
HRD3Q05787 HXT1YHR094C 1713 nt9.73□□□□□ -0.85
HRD3Q05787 PRY1YJL079C 900 nt9.73□□□□□ -0.85
HRD3Q05787 YBL086CYBL086C 1401 nt9.73□□□□□ -0.85
HRD3Q05787 BIO5YNR056C 1686 nt9.72□□□□□ -0.85
HRD3Q05787 LSB3YFR024C-A 1380 nt9.72□□□□□ -0.85
HRD3Q05787 RIB2YOL066C 1776 nt9.69□□□□□ -0.86
HRD3Q05787 ALG12YNR030W 1656 nt9.68□□□□□ -0.86
HRD3Q05787 BRR1YPR057W 1026 nt9.68□□□□□ -0.86
HRD3Q05787 LEU9YOR108W 1815 nt9.68□□□□□ -0.86
HRD3Q05787 MEP3YPR138C 1470 nt9.66□□□□□ -0.86
HRD3Q05787 YEL008WYEL008W 381 nt9.66□□□□□ -0.86
HRD3Q05787 HXT12YIL170W 1374 nt9.65□□□□□ -0.86
HRD3Q05787 ADH7YCR105W 1086 nt9.65□□□□□ -0.86
HRD3Q05787 TOA2YKL058W 369 nt9.65□□□□□ -0.86
HRD3Q05787 YMR103CYMR103C 363 nt9.65□□□□□ -0.86
HRD3Q05787 VRG4YGL225W 1014 nt9.63□□□□□ -0.87
HRD3Q05787 YJL055WYJL055W 738 nt9.62□□□□□ -0.87
HRD3Q05787 GPN2YOR262W 1044 nt9.62□□□□□ -0.87
HRD3Q05787 SHY1YGR112W 1170 nt9.61□□□□□ -0.87
HRD3Q05787 PAU15YIR041W 375 nt9.61□□□□□ -0.87
HRD3Q05787 MCH5YOR306C 1566 nt9.61□□□□□ -0.87
HRD3Q05787 CSM1YCR086W 573 nt9.6□□□□□ -0.87
HRD3Q05787 GND2YGR256W 1479 nt9.59□□□□□ -0.87
HRD3Q05787 UFO1YML088W 2007 nt9.58□□□□□ -0.88
HRD3Q05787 TRT2tT(CGU)K 72 nt9.57□□□□□ -0.88
HRD3Q05787 CPD1YGR247W 720 nt9.56□□□□□ -0.88
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms